STRINGSTRING
AIL97913.1 AIL97913.1 AIL98883.1 AIL98883.1 AIL98850.1 AIL98850.1 AIL98842.1 AIL98842.1 AIL98826.1 AIL98826.1 AIL98719.1 AIL98719.1 phoB phoB phoR phoR AIL98301.1 AIL98301.1 AIL98210.1 AIL98210.1 AIL98148.1 AIL98148.1 AIL98038.1 AIL98038.1 AIL97970.1 AIL97970.1 AIL97966.1 AIL97966.1 AIL97961.1 AIL97961.1 AIL97960.1 AIL97960.1 lysM lysM AIM01074.1 AIM01074.1 AIM01004.1 AIM01004.1 AIM00836.1 AIM00836.1 ctrA ctrA AIM00638.1 AIM00638.1 AIL99791.1 AIL99791.1 AIL99750.1 AIL99750.1 AIL99431.1 AIL99431.1 erpA erpA AIL99234.1 AIL99234.1 mgtE mgtE pleD pleD AIL98979.1 AIL98979.1 dapA dapA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIL97913.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
AIL98883.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (680 aa)
AIL98850.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
AIL98842.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
AIL98826.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (525 aa)
AIL98719.1Peptidase M15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. (409 aa)
phoBChemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
phoRHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
AIL98301.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
AIL98210.11-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
AIL98148.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
AIL98038.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
AIL97970.14,5-dihydroxyphthalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
AIL97966.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
AIL97961.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
AIL97960.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)
lysMPeptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
AIM01074.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
AIM01004.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
AIM00836.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
ctrAChemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
AIM00638.1Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. (360 aa)
AIL99791.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
AIL99750.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
AIL99431.1D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. (384 aa)
erpAHeme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family. (109 aa)
AIL99234.1D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. (500 aa)
mgtEMagnesium transporter; Acts as a magnesium transporter. (473 aa)
pleDResponse regulator PleD; Involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
AIL98979.1Galactose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
dapADihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (294 aa)
Your Current Organism:
Sinorhizobium meliloti
NCBI taxonomy Id: 382
Other names: ATCC 9930, CCUG 27879, CFBP 5561, DSM 30135, Ensifer meliloti, Ensifer sp. AC50a, Ensifer sp. AC50e, HAMBI 2148, IAM 12611, ICMP 12623, IFO 14782, JCM 20682, LMG 6133, LMG:6133, NBRC 14782, NCAIM B.01520, NRRL L-45, NZP 4027, Rhizobium meliloti, Rhizobium meliloti (megaplasmid pRME41B SYM), Rhizobium meliloti (plasmid pRmeGR4b), Rhizobium meliloti plasmid pRmeGR4b, Rhizobium sp. AC50e, S. meliloti
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