104 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101499189	U3 small nucleolar RNA-associated protein 18 homolog. (556 aa)
	LOC101509764	Uncharacterized protein LOC101509764. (177 aa)
	LOC101494094	U3 snoRNP-associated protein-like YAO. (500 aa)
	LOC101500258	Protein KRI1 homolog. (683 aa)
	LOC101490519	30S ribosomal protein S1, chloroplastic. (406 aa)
	LOC101515273	Nucleolar complex protein 4 homolog isoform X1. (601 aa)
	LOC101504958	Periodic tryptophan protein 2. (884 aa)
	LOC101500272	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	LOC101495827	Uncharacterized protein. (404 aa)
	LOC101514845	pre-rRNA-processing protein ESF2. (250 aa)
	LOC101515377	Uncharacterized protein LOC101515377. (177 aa)
	LOC101502811	Uncharacterized protein LOC101502811. (497 aa)
	LOC101489245	Ribosomal RNA processing protein 36 homolog. (251 aa)
	LOC101511184	U3 small nucleolar RNA-associated protein 25. (681 aa)
	LOC101507242	rRNA-processing protein UTP23 homolog. (286 aa)
	LOC101496276	Nucleolar complex protein 4 homolog isoform X1. (614 aa)
	LOC101491816	rRNA-processing protein fcf2-like. (200 aa)
	LOC101507153	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)
	LOC101502618	RNA helicase. (743 aa)
	LOC101506816	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (382 aa)
	LOC101505623	rRNA-processing protein fcf2-like. (200 aa)
	LOC101506931	Small subunit processome component 20 homolog. (2700 aa)
	LOC101489915	ATP-dependent DNA helicase At3g02060, chloroplastic. (823 aa)
	LOC101503920	Probable U3 small nucleolar RNA-associated protein 11. (185 aa)
	LOC101509269	WD repeat-containing protein 3. (901 aa)
	LOC101512065	Uncharacterized protein LOC101512065. (170 aa)
	LOC101491222	RRP12-like protein. (1290 aa)
	LOC101496628	rRNA-processing protein FCF1 homolog. (198 aa)
	LOC101491846	Uncharacterized protein C57A7.06. (877 aa)
	LOC101506294	Probable U3 small nucleolar RNA-associated protein 7. (536 aa)
	LOC101507389	Protein SLOW WALKER 1. (525 aa)
	LOC101508219	Uncharacterized protein LOC101508219. (517 aa)
	LOC101508977	Mediator of RNA polymerase II transcription subunit 36a-like. (308 aa)
	LOC101499888	Ribosomal RNA small subunit methyltransferase NEP1-like. (301 aa)
	LOC101506311	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (352 aa)
	LOC101494166	Probable RNA 3'-terminal phosphate cyclase-like protein. (382 aa)
	LOC101505995	Nucleolar protein 14. (946 aa)
	LOC101511029	Uncharacterized protein LOC101511029. (380 aa)
	LOC101510380	WD repeat-containing protein PCN. (788 aa)
	LOC101496540	Aberrant root formation protein 4. (592 aa)
	LOC101489092	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (352 aa)
	LOC101512085	U3 small nucleolar ribonucleoprotein protein IMP4. (293 aa)
	LOC101497949	Uncharacterized protein DDB_G0283697-like isoform X1. (334 aa)
	LOC101491456	RNA-binding protein pno1-like. (220 aa)
	LOC101497619	ATP-dependent RNA helicase DEAH13-like. (521 aa)
	LOC101488430	pre-rRNA-processing protein TSR1 homolog. (792 aa)
	LOC101506869	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (818 aa)
	LOC101500009	Uncharacterized protein LOC101500009 isoform X1. (393 aa)
	LOC101509198	Cell wall / vacuolar inhibitor of fructosidase 2. (182 aa)
	LOC101493654	Serine/threonine-protein kinase rio2. (456 aa)
	LOC101511568	U3 small nucleolar ribonucleoprotein protein IMP3. (182 aa)
	LOC101506536	DEAD-box ATP-dependent RNA helicase 36; Belongs to the DEAD box helicase family. (530 aa)
	LOC101512652	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (191 aa)
	LOC101512656	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1036 aa)
	LOC101489325	pre-rRNA-processing protein esf1. (735 aa)
	LOC101509855	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (229 aa)
	LOC101511571	Something about silencing protein 10 isoform X1. (677 aa)
	LOC101499289	Peter Pan-like protein. (354 aa)
	LOC101494300	Neuroguidin-like. (317 aa)
	LOC101515458	Uncharacterized protein LOC101515458. (191 aa)
	LOC101502685	WD repeat-containing protein 43 isoform X1. (629 aa)
	LOC101507743	18S rRNA (Guanine-N(7))-methyltransferase RID2-like. (151 aa)
	LOC101504099	Ribosome biogenesis protein BMS1 homolog isoform X1. (1197 aa)
	LOC101515595	Probable nucleolar protein 5-1. (553 aa)
	LOC101502906	Serine/threonine-protein kinase rio1-like. (489 aa)
	LOC101497116	U3 small nucleolar RNA-associated protein 6 homolog. (656 aa)
	LOC101499731	WD repeat-containing protein 75. (798 aa)
	LOC101504411	18S rRNA (Guanine-N(7))-methyltransferase RID2. (293 aa)
	LOC101513210	WD repeat-containing protein 43. (627 aa)
	LOC101514303	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	LOC101495596	Transducin beta-like protein 3. (907 aa)
	LOC101497992	U3 small nucleolar ribonucleoprotein protein MPP10 isoform X1. (519 aa)
	LOC101499626	DEAD-box ATP-dependent RNA helicase 10; Belongs to the DEAD box helicase family. (438 aa)
	LOC101513976	Protein LTV1 homolog isoform X1. (524 aa)
	LOC101514408	WD repeat-containing protein PCN-like. (824 aa)
	LOC101511601	CCAAT/enhancer-binding protein zeta. (1035 aa)
	LOC101501766	Nucleolar protein 6-like. (1049 aa)
	LOC101502091	Nucleolar protein 6-like. (1052 aa)
	LOC101515626	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (326 aa)
	LOC101504988	Uncharacterized protein LOC101504988. (442 aa)
	LOC101513454	U3 small nucleolar RNA-associated protein 21 homolog. (910 aa)
	LOC101505744	Neuroguidin-like. (317 aa)
	LOC101510449	Transcriptional regulator ATRX homolog. (288 aa)
	LOC101506175	Nucleolar protein 10. (694 aa)
	LOC101504471	rRNA-processing protein FCF1 homolog. (198 aa)
	LOC101504364	RNA-binding protein pno1-like. (220 aa)
	LOC101508447	Protein LTV1 homolog. (524 aa)
	LOC101505996	ATP-dependent RNA helicase DEAH13. (799 aa)
	LOC101492545	Uncharacterized protein At3g06530-like. (1128 aa)
	LOC101490268	Uncharacterized protein LOC101490268. (103 aa)
	LOC101494015	U3 small nucleolar RNA-associated protein 25-like. (103 aa)
	LOC101510995	Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (558 aa)
	LOC101501281	ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1. (1002 aa)
	LOC101515029	RNA-binding protein NOB1. (631 aa)
	LOC101489334	18S rRNA (Guanine-N(7))-methyltransferase RID2-like. (191 aa)
	LOC105852750	Neuroguidin-like. (127 aa)
	LOC101498904	Bystin. (441 aa)
	LOC101514234	RNA-binding protein pno1-like. (220 aa)
	LOC101488725	rRNA-processing protein FCF1 homolog. (95 aa)
	LOC101494958	Ribosomal RNA small subunit methyltransferase NEP1-like isoform X1. (311 aa)
	LOC101490154	Nucleolar protein 56 isoform X1. (525 aa)
	LOC101510150	Uncharacterized protein At3g06530. (1956 aa)
	LOC113788016	U3 small nucleolar RNA-associated protein 21-like. (156 aa)
	LOC101506748	Mediator of RNA polymerase II transcription subunit 36a-like isoform X1. (122 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101488430	LOC101488725	A0A1S2Y999	A0A1S3EJ89	pre-rRNA-processing protein TSR1 homolog.	rRNA-processing protein FCF1 homolog.	0.639
LOC101488430	LOC101489092	A0A1S2Y999	A0A1S2Y5E3	pre-rRNA-processing protein TSR1 homolog.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.940
LOC101488430	LOC101489325	A0A1S2Y999	A0A1S2YHV7	pre-rRNA-processing protein TSR1 homolog.	pre-rRNA-processing protein esf1.	0.879
LOC101488430	LOC101489334	A0A1S2Y999	A0A1S3EBB5	pre-rRNA-processing protein TSR1 homolog.	18S rRNA (Guanine-N(7))-methyltransferase RID2-like.	0.959
LOC101488430	LOC101489915	A0A1S2Y999	A0A1S2XS48	pre-rRNA-processing protein TSR1 homolog.	ATP-dependent DNA helicase At3g02060, chloroplastic.	0.663
LOC101488430	LOC101490154	A0A1S2Y999	A0A3Q7XJW3	pre-rRNA-processing protein TSR1 homolog.	Nucleolar protein 56 isoform X1.	0.638
LOC101488430	LOC101490268	A0A1S2Y999	A0A1S3DUW1	pre-rRNA-processing protein TSR1 homolog.	Uncharacterized protein LOC101490268.	0.945
LOC101488430	LOC101490519	A0A1S2Y999	A0A1S2XAX2	pre-rRNA-processing protein TSR1 homolog.	30S ribosomal protein S1, chloroplastic.	0.734
LOC101488430	LOC101491222	A0A1S2Y999	A0A1S2XVN0	pre-rRNA-processing protein TSR1 homolog.	RRP12-like protein.	0.992
LOC101488430	LOC101491456	A0A1S2Y999	A0A1S2Y7P1	pre-rRNA-processing protein TSR1 homolog.	RNA-binding protein pno1-like.	0.985
LOC101488430	LOC101491846	A0A1S2Y999	A0A1S2XWA8	pre-rRNA-processing protein TSR1 homolog.	Uncharacterized protein C57A7.06.	0.898
LOC101488430	LOC101492545	A0A1S2Y999	A0A1S2Z975	pre-rRNA-processing protein TSR1 homolog.	Uncharacterized protein At3g06530-like.	0.900
LOC101488430	LOC101493654	A0A1S2Y999	A0A1S2YD59	pre-rRNA-processing protein TSR1 homolog.	Serine/threonine-protein kinase rio2.	0.996
LOC101488430	LOC101494015	A0A1S2Y999	A0A1S3DY62	pre-rRNA-processing protein TSR1 homolog.	U3 small nucleolar RNA-associated protein 25-like.	0.890
LOC101488430	LOC101494094	A0A1S2Y999	A0A1S2XAR5	pre-rRNA-processing protein TSR1 homolog.	U3 snoRNP-associated protein-like YAO.	0.901
LOC101488430	LOC101494166	A0A1S2Y999	A0A1S2Y344	pre-rRNA-processing protein TSR1 homolog.	Probable RNA 3'-terminal phosphate cyclase-like protein.	0.949
LOC101488430	LOC101494300	A0A1S2Y999	A0A1S2YKK5	pre-rRNA-processing protein TSR1 homolog.	Neuroguidin-like.	0.576
LOC101488430	LOC101494958	A0A1S2Y999	A0A3Q7X1Y0	pre-rRNA-processing protein TSR1 homolog.	Ribosomal RNA small subunit methyltransferase NEP1-like isoform X1.	0.503
LOC101488430	LOC101495596	A0A1S2Y999	A0A1S2YRR5	pre-rRNA-processing protein TSR1 homolog.	Transducin beta-like protein 3.	0.902
LOC101488430	LOC101495827	A0A1S2Y999	A0A1S2XGV5	pre-rRNA-processing protein TSR1 homolog.	Uncharacterized protein.	0.914