20 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101499318	Co-chaperone protein p23-2. (151 aa)
	LOC101505628	Heat shock protein 90-6, mitochondrial. (692 aa)
	LOC101491735	Heat shock cognate protein 80. (699 aa)
	LOC101513023	Activator of 90 kDa heat shock protein ATPase homolog 1. (358 aa)
	LOC101512168	Uncharacterized protein OsI_027940-like isoform X1. (215 aa)
	LOC101495772	Cysteine and histidine-rich domain-containing protein RAR1. (215 aa)
	LOC101511432	Activator of 90 kDa heat shock protein ATPase homolog 1-like. (349 aa)
	LOC101497529	Serine/threonine-protein phosphatase 5. (324 aa)
	LOC101497414	Endoplasmin homolog isoform X1. (817 aa)
	LOC101515120	Heat shock cognate protein 80. (699 aa)
	LOC101508253	Uncharacterized protein LOC101508253 isoform X2. (1183 aa)
	LOC101491270	Peptidyl-prolyl cis-trans isomerase CYP40-like isoform X1. (361 aa)
	LOC101510309	Peptidyl-prolyl cis-trans isomerase CYP40-like. (360 aa)
	LOC101491622	Uncharacterized protein LOC101491622 isoform X1. (2151 aa)
	LOC101489485	Protein SGT1 homolog A. (376 aa)
	LOC101494428	hsp70-Hsp90 organizing protein 3-like. (582 aa)
	LOC101515303	Uncharacterized protein LOC101515303. (198 aa)
	LOC101513028	Heat shock protein 90-5, chloroplastic. (792 aa)
	LOC101490164	Protein SGT1 homolog. (359 aa)
	LOC101511551	Heat shock protein 83. (699 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101489485	LOC101490164	A0A1S2YXL2	A0A1S2Z814	Protein SGT1 homolog A.	Protein SGT1 homolog.	0.905
LOC101489485	LOC101491735	A0A1S2YXL2	A0A1S2XPL0	Protein SGT1 homolog A.	Heat shock cognate protein 80.	0.995
LOC101489485	LOC101494428	A0A1S2YXL2	A0A1S2YXU4	Protein SGT1 homolog A.	hsp70-Hsp90 organizing protein 3-like.	0.439
LOC101489485	LOC101495772	A0A1S2YXL2	A0A1S2XYR9	Protein SGT1 homolog A.	Cysteine and histidine-rich domain-containing protein RAR1.	0.992
LOC101489485	LOC101497414	A0A1S2YXL2	A0A1S2Y4R8	Protein SGT1 homolog A.	Endoplasmin homolog isoform X1.	0.996
LOC101489485	LOC101497529	A0A1S2YXL2	A0A1S2Y1Q7	Protein SGT1 homolog A.	Serine/threonine-protein phosphatase 5.	0.433
LOC101489485	LOC101499318	A0A1S2YXL2	A0A1S2XJQ8	Protein SGT1 homolog A.	Co-chaperone protein p23-2.	0.642
LOC101489485	LOC101505628	A0A1S2YXL2	A0A1S2XMF6	Protein SGT1 homolog A.	Heat shock protein 90-6, mitochondrial.	0.995
LOC101489485	LOC101508253	A0A1S2YXL2	A0A1S2YEB5	Protein SGT1 homolog A.	Uncharacterized protein LOC101508253 isoform X2.	0.979
LOC101489485	LOC101511432	A0A1S2YXL2	A0A1S2Y1K6	Protein SGT1 homolog A.	Activator of 90 kDa heat shock protein ATPase homolog 1-like.	0.521
LOC101489485	LOC101511551	A0A1S2YXL2	A0A1S2Z8C0	Protein SGT1 homolog A.	Heat shock protein 83.	0.995
LOC101489485	LOC101512168	A0A1S2YXL2	A0A1S2XTU0	Protein SGT1 homolog A.	Uncharacterized protein OsI_027940-like isoform X1.	0.642
LOC101489485	LOC101513023	A0A1S2YXL2	A0A1S2XRX3	Protein SGT1 homolog A.	Activator of 90 kDa heat shock protein ATPase homolog 1.	0.521
LOC101489485	LOC101513028	A0A1S2YXL2	A0A1S2Z455	Protein SGT1 homolog A.	Heat shock protein 90-5, chloroplastic.	0.995
LOC101489485	LOC101515120	A0A1S2YXL2	A0A1S2Y850	Protein SGT1 homolog A.	Heat shock cognate protein 80.	0.995
LOC101489485	LOC101515303	A0A1S2YXL2	A0A1S2Z157	Protein SGT1 homolog A.	Uncharacterized protein LOC101515303.	0.513
LOC101490164	LOC101489485	A0A1S2Z814	A0A1S2YXL2	Protein SGT1 homolog.	Protein SGT1 homolog A.	0.905
LOC101490164	LOC101491735	A0A1S2Z814	A0A1S2XPL0	Protein SGT1 homolog.	Heat shock cognate protein 80.	0.995
LOC101490164	LOC101494428	A0A1S2Z814	A0A1S2YXU4	Protein SGT1 homolog.	hsp70-Hsp90 organizing protein 3-like.	0.439
LOC101490164	LOC101495772	A0A1S2Z814	A0A1S2XYR9	Protein SGT1 homolog.	Cysteine and histidine-rich domain-containing protein RAR1.	0.992