38 items (Cicer arietinum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

Your Input:
	LOC101512128	Probable CCR4-associated factor 1 homolog 11. (280 aa)
	LOC101502421	Carbon catabolite repressor protein 4 homolog 5. (421 aa)
	LOC101494731	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1104 aa)
	LOC101498997	Protein RRP6-like 2. (880 aa)
	LOC101490003	Polyribonucleotide nucleotidyltransferase 2, mitochondrial. (976 aa)
	LOC101496386	Probable CCR4-associated factor 1 homolog 11. (195 aa)
	LOC101490129	Oligoribonuclease. (238 aa)
	LOC101492954	Protein RRP6-like 2 isoform X1. (709 aa)
	LOC101508845	F-box protein At5g03970. (415 aa)
	LOC101509087	Probable CCR4-associated factor 1 homolog 7. (271 aa)
	LOC101493332	Uncharacterized calcium-binding protein At1g02270 isoform X1. (452 aa)
	LOC101490731	LOW QUALITY PROTEIN: carbon catabolite repressor protein 4 homolog 3. (459 aa)
	LOC101514705	Probable CCR4-associated factor 1 homolog 7. (282 aa)
	LOC101491599	Ribonuclease II, chloroplastic/mitochondrial. (781 aa)
	LOC101514715	Probable CCR4-associated factor 1 homolog 7. (277 aa)
	LOC101488559	Uncharacterized protein LOC101488559. (310 aa)
	LOC101503137	Uncharacterized calcium-binding protein At1g02270-like isoform X1. (473 aa)
	LOC101495396	3'-5' exoribonuclease 1-like. (422 aa)
	LOC101501336	Uncharacterized exonuclease domain-containing protein At3g15140 isoform X1. (307 aa)
	LOC101492611	Decapping nuclease DXO homolog, chloroplastic isoform X1. (513 aa)
	LOC101498471	Carbon catabolite repressor protein 4 homolog 4-like. (388 aa)
	LOC101512617	Carbon catabolite repressor protein 4 homolog 2-like. (586 aa)
	LOC101503493	Protein RRP6-like 3 isoform X1. (894 aa)
	LOC101512818	U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (284 aa)
	LOC101495869	poly(A)-specific ribonuclease PARN. (721 aa)
	LOC101490048	Uncharacterized calcium-binding protein At1g02270-like. (448 aa)
	LOC101510373	Probable CCR4-associated factor 1 homolog 11. (160 aa)
	LOC101491106	poly(A)-specific ribonuclease PARN-like isoform X1. (624 aa)
	LOC101492293	Carbon catabolite repressor protein 4 homolog 2-like. (600 aa)
	LOC101497383	Probable CCR4-associated factor 1 homolog 11 isoform X1. (300 aa)
	LOC101515009	Exosome complex component RRP45A-like. (450 aa)
	LOC101506965	Carbon catabolite repressor protein 4 homolog 6 isoform X1. (828 aa)
	LOC105851178	Probable CCR4-associated factor 1 homolog 11. (139 aa)
	LOC101496250	Probable CCR4-associated factor 1 homolog 11. (282 aa)
	LOC101501518	Probable CCR4-associated factor 1 homolog 11. (278 aa)
	LOC101496147	Exosome complex exonuclease RRP44 homolog A; Belongs to the RNR ribonuclease family. (950 aa)
	LOC113783913	Probable CCR4-associated factor 1 homolog 9. (334 aa)
	LOC101497377	Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1. (972 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101488559	LOC101496250	A0A1S2YP53	A0A1S3EAJ3	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101496386	A0A1S2YP53	A0A1S2XLV2	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101497383	A0A1S2YP53	A0A1S3E1N7	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11 isoform X1.	0.508
LOC101488559	LOC101501518	A0A1S2YP53	A0A1S3EC82	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101508845	A0A1S2YP53	A0A1S2XUI0	Uncharacterized protein LOC101488559.	F-box protein At5g03970.	0.508
LOC101488559	LOC101509087	A0A1S2YP53	A0A1S2Y933	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 7.	0.508
LOC101488559	LOC101510373	A0A1S2YP53	A0A1S3DYD5	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101512128	A0A1S2YP53	A0A3Q7YC49	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101514705	A0A1S2YP53	A0A1S2YH00	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 7.	0.508
LOC101488559	LOC101514715	A0A1S2YP53	A0A1S2YMQ2	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 7.	0.508
LOC101488559	LOC105851178	A0A1S2YP53	A0A1S3E9N5	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC113783913	A0A1S2YP53	A0A3Q7XYJ1	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 9.	0.508
LOC101490003	LOC101491106	A0A1S2XIV1	A0A1S3E0R0	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	poly(A)-specific ribonuclease PARN-like isoform X1.	0.469
LOC101490003	LOC101491599	A0A1S2XIV1	A0A1S2YLH7	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Ribonuclease II, chloroplastic/mitochondrial.	0.750
LOC101490003	LOC101492954	A0A1S2XIV1	A0A1S2XR27	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Protein RRP6-like 2 isoform X1.	0.485
LOC101490003	LOC101494731	A0A1S2XIV1	A0A1S2XG80	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.582
LOC101490003	LOC101496147	A0A1S2XIV1	A0A1S3EFL5	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Exosome complex exonuclease RRP44 homolog A; Belongs to the RNR ribonuclease family.	0.582
LOC101490003	LOC101497377	A0A1S2XIV1	A0A3Q7Y926	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1.	0.912
LOC101490003	LOC101498997	A0A1S2XIV1	A0A1S2XI21	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Protein RRP6-like 2.	0.485
LOC101490003	LOC101503493	A0A1S2XIV1	A0A1S2Z4U9	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Protein RRP6-like 3 isoform X1.	0.485