94 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101512128	Probable CCR4-associated factor 1 homolog 11. (280 aa)
	LOC101497377	Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1. (972 aa)
	LOC113783913	Probable CCR4-associated factor 1 homolog 9. (334 aa)
	LOC113786389	Uncharacterized protein At5g06450-like. (249 aa)
	LOC101510799	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (553 aa)
	LOC101496147	Exosome complex exonuclease RRP44 homolog A; Belongs to the RNR ribonuclease family. (950 aa)
	LOC101501518	Probable CCR4-associated factor 1 homolog 11. (278 aa)
	LOC101498761	Protein NEN4 isoform X1. (272 aa)
	LOC101496250	Probable CCR4-associated factor 1 homolog 11. (282 aa)
	LOC105851178	Probable CCR4-associated factor 1 homolog 11. (139 aa)
	LOC101512331	Uncharacterized protein LOC101512331 isoform X1. (447 aa)
	LOC101492775	DNA polymerase. (1087 aa)
	LOC101506965	Carbon catabolite repressor protein 4 homolog 6 isoform X1. (828 aa)
	LOC101497200	Small RNA degrading nuclease 5 isoform X1. (573 aa)
	LOC101492210	Uncharacterized protein LOC101492210. (415 aa)
	LOC101515009	Exosome complex component RRP45A-like. (450 aa)
	LOC101496021	LOW QUALITY PROTEIN: uncharacterized protein LOC101496021. (212 aa)
	LOC101513142	Exonuclease DPD1, chloroplastic/mitochondrial. (332 aa)
	LOC101491968	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (944 aa)
	LOC101497383	Probable CCR4-associated factor 1 homolog 11 isoform X1. (300 aa)
	LOC101492293	Carbon catabolite repressor protein 4 homolog 2-like. (600 aa)
	LOC101515631	tyrosyl-DNA phosphodiesterase 1 isoform X1. (636 aa)
	LOC105851827	Uncharacterized protein LOC105851827. (210 aa)
	LOC101491106	poly(A)-specific ribonuclease PARN-like isoform X1. (624 aa)
	LOC101494976	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (916 aa)
	LOC101510373	Probable CCR4-associated factor 1 homolog 11. (160 aa)
	LOC101513472	Ribonuclease J. (780 aa)
	LOC101490048	Uncharacterized calcium-binding protein At1g02270-like. (448 aa)
	LOC101495869	poly(A)-specific ribonuclease PARN. (721 aa)
	LOC101512818	U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (284 aa)
	LOC101503493	Protein RRP6-like 3 isoform X1. (894 aa)
	LOC101505758	Uncharacterized protein LOC101505758. (315 aa)
	LOC101493934	Werner Syndrome-like exonuclease. (210 aa)
	LOC101491117	Werner Syndrome-like exonuclease. (233 aa)
	LOC101490791	Werner Syndrome-like exonuclease. (231 aa)
	LOC101512617	Carbon catabolite repressor protein 4 homolog 2-like. (586 aa)
	LOC101500618	5' exonuclease Apollo. (487 aa)
	LOC101502421	Carbon catabolite repressor protein 4 homolog 5. (421 aa)
	LOC101507566	Exonuclease 1 isoform X1. (576 aa)
	LOC101498471	Carbon catabolite repressor protein 4 homolog 4-like. (388 aa)
	LOC101492611	Decapping nuclease DXO homolog, chloroplastic isoform X1. (513 aa)
	LOC101501336	Uncharacterized exonuclease domain-containing protein At3g15140 isoform X1. (307 aa)
	LOC101495396	3'-5' exoribonuclease 1-like. (422 aa)
	LOC101503137	Uncharacterized calcium-binding protein At1g02270-like isoform X1. (473 aa)
	LOC101493577	DNA-(Apurinic or apyrimidinic site) lyase 2 isoform X1. (612 aa)
	LOC101500269	Protein NEN1. (491 aa)
	LOC101488559	Uncharacterized protein LOC101488559. (310 aa)
	LOC101497783	Uncharacterized protein LOC101497783. (452 aa)
	LOC101514715	Probable CCR4-associated factor 1 homolog 7. (277 aa)
	LOC101491599	Ribonuclease II, chloroplastic/mitochondrial. (781 aa)
	LOC101491694	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (854 aa)
	LOC101497104	Exosome complex component RRP41-like. (257 aa)
	LOC101514286	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2212 aa)
	LOC101502681	Exonuclease V, chloroplastic-like. (401 aa)
	LOC101491897	Uncharacterized protein LOC101491897. (452 aa)
	LOC101514705	Probable CCR4-associated factor 1 homolog 7. (282 aa)
	LOC101511143	Exonuclease 1 isoform X1. (721 aa)
	LOC101490731	LOW QUALITY PROTEIN: carbon catabolite repressor protein 4 homolog 3. (459 aa)
	LOC101515128	5' exonuclease Apollo isoform X1. (548 aa)
	LOC101493332	Uncharacterized calcium-binding protein At1g02270 isoform X1. (452 aa)
	LOC101490726	Werner Syndrome-like exonuclease. (301 aa)
	LOC101497306	DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (361 aa)
	LOC101494492	DNA cross-link repair protein SNM1. (676 aa)
	LOC101509087	Probable CCR4-associated factor 1 homolog 7. (271 aa)
	LOC101490066	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (908 aa)
	LOC101510274	DNA polymerase I B, chloroplastic/mitochondrial-like isoform X1. (1087 aa)
	LOC101497952	Ribonuclease J-like isoform X1. (863 aa)
	LOC101510269	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1091 aa)
	LOC101508355	Small RNA degrading nuclease 1-like. (518 aa)
	LOC101510807	Transcription factor bHLH140. (751 aa)
	LOC101489628	piRNA biogenesis protein EXD1. (353 aa)
	LOC101514139	Exonuclease mut-7 homolog isoform X1. (516 aa)
	LOC101494896	Exonuclease V, chloroplastic-like. (429 aa)
	LOC101493303	Uncharacterized protein At5g06450-like. (196 aa)
	LOC101504587	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (409 aa)
	LOC101514562	Uncharacterized protein LOC101514562. (558 aa)
	LOC101494356	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (958 aa)
	LOC101508845	F-box protein At5g03970. (415 aa)
	LOC101505421	Putative deoxyribonuclease TATDN1. (319 aa)
	LOC101499023	Exosome complex exonuclease RRP46 homolog isoform X1. (243 aa)
	LOC101492954	Protein RRP6-like 2 isoform X1. (709 aa)
	LOC101491110	DNA cross-link repair protein SNM1 isoform X1. (520 aa)
	LOC101490997	DNA polymerase I A, chloroplastic/mitochondrial-like. (1082 aa)
	LOC101490129	Oligoribonuclease. (238 aa)
	LOC101496386	Probable CCR4-associated factor 1 homolog 11. (195 aa)
	LOC101507644	RNA exonuclease 4. (254 aa)
	LOC101490003	Polyribonucleotide nucleotidyltransferase 2, mitochondrial. (976 aa)
	LOC101504550	Apoptosis-enhancing nuclease-like. (357 aa)
	LOC101498997	Protein RRP6-like 2. (880 aa)
	LOC101494731	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1104 aa)
	LOC101499107	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (710 aa)
	LOC101513725	Uncharacterized protein LOC101513725. (212 aa)
	LOC101505475	RNA exonuclease 4-like isoform X1. (353 aa)
	LOC101507429	Cleavage and polyadenylation specificity factor subunit 3-I. (687 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101488559	LOC101496250	A0A1S2YP53	A0A1S3EAJ3	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101496386	A0A1S2YP53	A0A1S2XLV2	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101497383	A0A1S2YP53	A0A1S3E1N7	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11 isoform X1.	0.508
LOC101488559	LOC101501518	A0A1S2YP53	A0A1S3EC82	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101508845	A0A1S2YP53	A0A1S2XUI0	Uncharacterized protein LOC101488559.	F-box protein At5g03970.	0.508
LOC101488559	LOC101509087	A0A1S2YP53	A0A1S2Y933	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 7.	0.508
LOC101488559	LOC101510373	A0A1S2YP53	A0A1S3DYD5	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101512128	A0A1S2YP53	A0A3Q7YC49	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC101514705	A0A1S2YP53	A0A1S2YH00	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 7.	0.508
LOC101488559	LOC101514715	A0A1S2YP53	A0A1S2YMQ2	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 7.	0.508
LOC101488559	LOC105851178	A0A1S2YP53	A0A1S3E9N5	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 11.	0.508
LOC101488559	LOC113783913	A0A1S2YP53	A0A3Q7XYJ1	Uncharacterized protein LOC101488559.	Probable CCR4-associated factor 1 homolog 9.	0.508
LOC101490003	LOC101491106	A0A1S2XIV1	A0A1S3E0R0	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	poly(A)-specific ribonuclease PARN-like isoform X1.	0.469
LOC101490003	LOC101491599	A0A1S2XIV1	A0A1S2YLH7	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Ribonuclease II, chloroplastic/mitochondrial.	0.750
LOC101490003	LOC101492954	A0A1S2XIV1	A0A1S2XR27	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Protein RRP6-like 2 isoform X1.	0.485
LOC101490003	LOC101494731	A0A1S2XIV1	A0A1S2XG80	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.582
LOC101490003	LOC101496147	A0A1S2XIV1	A0A1S3EFL5	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Exosome complex exonuclease RRP44 homolog A; Belongs to the RNR ribonuclease family.	0.582
LOC101490003	LOC101497104	A0A1S2XIV1	A0A1S2YK67	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Exosome complex component RRP41-like.	0.472
LOC101490003	LOC101497377	A0A1S2XIV1	A0A3Q7Y926	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1.	0.912
LOC101490003	LOC101497952	A0A1S2XIV1	A0A1S2Y7H8	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Ribonuclease J-like isoform X1.	0.528