68 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101501497	Casein kinase 1-like protein HD16. (699 aa)
	LOC101514549	G-protein coupled receptor 1-like. (188 aa)
	LOC105851812	Uncharacterized protein LOC105851812 isoform X1. (94 aa)
	LOC101495334	Casein kinase 1-like protein HD16. (599 aa)
	LOC101498469	Uncharacterized protein LOC101498469. (1255 aa)
	LOC101502192	Uncharacterized protein LOC101502192. (559 aa)
	LOC101511720	Casein kinase 1-like protein HD16. (700 aa)
	LOC101507637	EIN3-binding F-box protein 2-like. (639 aa)
	LOC101494316	Heptahelical transmembrane protein 1. (367 aa)
	LOC101499521	Dual specificity protein phosphatase 1 isoform X1. (185 aa)
	LOC101490851	20 kDa chaperonin, chloroplastic-like; Belongs to the GroES chaperonin family. (253 aa)
	LOC101494515	F-box/kelch-repeat protein At1g80440-like. (359 aa)
	LOC101497110	Ethylene-overproduction protein 1-like. (955 aa)
	LOC101507213	Protein FAF-like, chloroplastic. (527 aa)
	LOC101504517	F-box protein SKIP14. (503 aa)
	LOC101513074	Zinc finger protein 4-like. (247 aa)
	LOC101496449	Zinc finger protein 4-like isoform X1. (231 aa)
	LOC101490827	Protein LAZ1 homolog 1. (489 aa)
	LOC101496978	Regulator of G-protein signaling 1. (463 aa)
	LOC101514595	Heat shock 70 kDa protein 17. (886 aa)
	LOC101502981	WD and tetratricopeptide repeats protein 1. (764 aa)
	LOC101492439	Uncharacterized protein LOC101492439 isoform X1. (333 aa)
	LOC101505788	Rho GTPase-activating protein REN1-like isoform X1. (912 aa)
	LOC101511444	Probable ADP,ATP carrier protein At5g56450; Belongs to the mitochondrial carrier (TC 2.A.29) family. (330 aa)
	LOC101511890	B-box zinc finger protein 20-like. (243 aa)
	LOC101511671	Protein LAZ1. (478 aa)
	LOC101502880	Protein FREE1. (572 aa)
	LOC101509625	Ethylene-overproduction protein 1. (935 aa)
	LOC101514140	E3 ubiquitin-protein ligase AIP2. (313 aa)
	LOC101496968	E3 ubiquitin-protein ligase RZF1-like. (264 aa)
	LOC101502970	Pentatricopeptide repeat-containing protein At5g11310, mitochondrial. (596 aa)
	LOC101509842	Probable WRKY transcription factor 17. (346 aa)
	LOC101508138	Protein REVERSION-TO-ETHYLENE SENSITIVITY1. (236 aa)
	LOC101488976	G-protein coupled receptor 1. (319 aa)
	LOC101514587	EIN3-binding F-box protein 1. (641 aa)
	LOC101512832	Serine/threonine-protein kinase CTR1 isoform X1. (847 aa)
	LOC101498940	Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (526 aa)
	LOC101511536	Protein FANTASTIC FOUR 1. (249 aa)
	LOC101496520	Uncharacterized protein OsI_027940-like. (186 aa)
	LOC101489612	Serine/threonine-protein kinase EDR1. (972 aa)
	LOC101494888	ETO1-like protein 1 isoform X1. (908 aa)
	LOC101513255	Protein FANTASTIC FOUR 1-like. (284 aa)
	LOC101500077	Ethylene-overproduction protein 1. (946 aa)
	LOC101510447	Leucine carboxyl methyltransferase 1 homolog; Involved in brassinosteroid (BR) signaling. (331 aa)
	LOC101513995	RCC1 domain-containing protein RUG3, mitochondrial. (435 aa)
	LOC101512153	RNA polymerase II C-terminal domain phosphatase-like 3. (1247 aa)
	LOC101493910	Zinc finger protein 4. (267 aa)
	LOC101498807	Rho GTPase-activating protein REN1 isoform X1. (995 aa)
	LOC101507352	Protein-tyrosine-phosphatase IBR5. (269 aa)
	LOC101501751	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (448 aa)
	LOC101498320	20 kDa chaperonin, chloroplastic-like; Belongs to the GroES chaperonin family. (254 aa)
	LOC101511370	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. (333 aa)
	LOC101506773	Zinc finger transcription factor YY1. (373 aa)
	LOC101501412	F-box/kelch-repeat protein At1g80440-like. (364 aa)
	LOC101512168	Uncharacterized protein OsI_027940-like isoform X1. (215 aa)
	LOC101500300	Geranylgeranyl transferase type-1 subunit beta. (352 aa)
	F-BOX1	KFB-type F-box protein. (345 aa)
	LOC101515605	Zinc finger protein 7-like. (196 aa)
	LOC101507859	Uncharacterized protein LOC101507859. (896 aa)
	LOC101493913	Probable E3 ubiquitin-protein ligase RHC1A isoform X1. (337 aa)
	LOC101497204	EIN3-binding F-box protein 1-like. (642 aa)
	LOC113784793	Uncharacterized protein LOC113784793. (166 aa)
	LOC101505524	Probable E3 ubiquitin-protein ligase RHC1A isoform X1. (288 aa)
	LOC101511411	Zinc finger protein 4-like. (257 aa)
	LOC105852330	Uncharacterized protein LOC105852330. (150 aa)
	LOC101507520	LOW QUALITY PROTEIN: lipase-like PAD4. (632 aa)
	LOC101503559	LOW QUALITY PROTEIN: protein FAF-like, chloroplastic. (273 aa)
	LOC101489954	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KEG. (1611 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101489612	LOC101507520	A0A1S2XWU1	A0A1S3EA07	Serine/threonine-protein kinase EDR1.	LOW QUALITY PROTEIN: lipase-like PAD4.	0.493
LOC101489954	LOC101514140	A0A1S3E4J7	A0A1S2Y5G4	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KEG.	E3 ubiquitin-protein ligase AIP2.	0.565
LOC101489954	LOC105851812	A0A1S3E4J7	A0A1S3E0I3	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KEG.	Uncharacterized protein LOC105851812 isoform X1.	0.564
LOC101490851	LOC101514595	A0A1S2YPR7	A0A1S2YCE0	20 kDa chaperonin, chloroplastic-like; Belongs to the GroES chaperonin family.	Heat shock 70 kDa protein 17.	0.684
LOC101498320	LOC101514595	A0A1S2XHG2	A0A1S2YCE0	20 kDa chaperonin, chloroplastic-like; Belongs to the GroES chaperonin family.	Heat shock 70 kDa protein 17.	0.684
LOC101500300	LOC101501751	A0A1S2XQS9	A0A1S2XIX6	Geranylgeranyl transferase type-1 subunit beta.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.452
LOC101500300	LOC101511370	A0A1S2XQS9	A0A1S2XBT8	Geranylgeranyl transferase type-1 subunit beta.	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.	0.991
LOC101501751	LOC101500300	A0A1S2XIX6	A0A1S2XQS9	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Geranylgeranyl transferase type-1 subunit beta.	0.452
LOC101501751	LOC101502981	A0A1S2XIX6	A0A1S2YBC8	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	WD and tetratricopeptide repeats protein 1.	0.546
LOC101501751	LOC101511370	A0A1S2XIX6	A0A1S2XBT8	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.	0.999
LOC101502981	LOC101501751	A0A1S2YBC8	A0A1S2XIX6	WD and tetratricopeptide repeats protein 1.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.546
LOC101502981	LOC105851812	A0A1S2YBC8	A0A1S3E0I3	WD and tetratricopeptide repeats protein 1.	Uncharacterized protein LOC105851812 isoform X1.	0.720
LOC101504517	LOC101515605	A0A1S2YH66	A0A3Q7YGJ0	F-box protein SKIP14.	Zinc finger protein 7-like.	0.469
LOC101507520	LOC101489612	A0A1S3EA07	A0A1S2XWU1	LOW QUALITY PROTEIN: lipase-like PAD4.	Serine/threonine-protein kinase EDR1.	0.493
LOC101507637	LOC101514587	A0A1S2YQV2	A0A1S2Y3D2	EIN3-binding F-box protein 2-like.	EIN3-binding F-box protein 1.	0.901
LOC101511370	LOC101500300	A0A1S2XBT8	A0A1S2XQS9	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.	Geranylgeranyl transferase type-1 subunit beta.	0.991
LOC101511370	LOC101501751	A0A1S2XBT8	A0A1S2XIX6	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.	Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.	0.999
LOC101514140	LOC101489954	A0A1S2Y5G4	A0A1S3E4J7	E3 ubiquitin-protein ligase AIP2.	LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KEG.	0.565
LOC101514140	LOC105851812	A0A1S2Y5G4	A0A1S3E0I3	E3 ubiquitin-protein ligase AIP2.	Uncharacterized protein LOC105851812 isoform X1.	0.453
LOC101514587	LOC101507637	A0A1S2Y3D2	A0A1S2YQV2	EIN3-binding F-box protein 1.	EIN3-binding F-box protein 2-like.	0.901