31 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101507429	Cleavage and polyadenylation specificity factor subunit 3-I. (687 aa)
	LOC101498997	Protein RRP6-like 2. (880 aa)
	LOC101495059	snRNA-activating protein complex subunit isoform X1. (441 aa)
	LOC101490361	Protein SIEL. (954 aa)
	LOC101492954	Protein RRP6-like 2 isoform X1. (709 aa)
	LOC101499023	Exosome complex exonuclease RRP46 homolog isoform X1. (243 aa)
	LOC101492406	H/ACA ribonucleoprotein complex subunit 3-like protein. (64 aa)
	LOC101500832	Exosome complex component RRP41 homolog isoform X1. (241 aa)
	LOC101506177	Exosome complex component RRP4 homolog. (327 aa)
	LOC101501810	Exosome complex component RRP43. (302 aa)
	LOC101492547	Exosome complex component RRP42-like. (286 aa)
	LOC101506989	Uncharacterized protein LOC101506989 isoform X1. (373 aa)
	LOC101513077	H/ACA ribonucleoprotein complex subunit 4. (580 aa)
	LOC101497104	Exosome complex component RRP41-like. (257 aa)
	LOC101498786	Uncharacterized protein LOC101498786 isoform X1. (279 aa)
	LOC101489670	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (159 aa)
	LOC101500694	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (159 aa)
	LOC101491925	Exosome complex component RRP42-like. (286 aa)
	LOC101506570	H/ACA ribonucleoprotein complex subunit 3-like protein. (64 aa)
	LOC101512154	Integrator complex subunit 9-like. (679 aa)
	LOC101503493	Protein RRP6-like 3 isoform X1. (894 aa)
	LOC101512818	U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (284 aa)
	LOC101499865	Integrator complex subunit 9-like isoform X1. (679 aa)
	LOC101504662	Putative exosome complex component rrp40. (237 aa)
	LOC101515009	Exosome complex component RRP45A-like. (450 aa)
	LOC105852109	Uncharacterized protein LOC105852109. (174 aa)
	LOC101503755	LOW QUALITY PROTEIN: probable RNA methyltransferase At5g51130. (273 aa)
	LOC101491819	LOW QUALITY PROTEIN: exosome complex component RRP40-like. (149 aa)
	LOC101512307	LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-II. (532 aa)
	LOC101492093	Uncharacterized protein LOC101492093. (121 aa)
	LOC101514184	Integrator complex subunit 3 isoform X1. (529 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101489670	LOC101491819	A0A1S2YR46	A0A3Q7XVA3	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	0.457
LOC101489670	LOC101491925	A0A1S2YR46	A0A1S2YSM4	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Exosome complex component RRP42-like.	0.571
LOC101489670	LOC101492406	A0A1S2YR46	A0A1S2XSD0	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	H/ACA ribonucleoprotein complex subunit 3-like protein.	0.991
LOC101489670	LOC101492547	A0A1S2YR46	A0A1S2Y464	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Exosome complex component RRP42-like.	0.571
LOC101489670	LOC101492954	A0A1S2YR46	A0A1S2XR27	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Protein RRP6-like 2 isoform X1.	0.525
LOC101489670	LOC101497104	A0A1S2YR46	A0A1S2YK67	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Exosome complex component RRP41-like.	0.567
LOC101489670	LOC101498997	A0A1S2YR46	A0A1S2XI21	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Protein RRP6-like 2.	0.525
LOC101489670	LOC101499023	A0A1S2YR46	A0A1S2XS35	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Exosome complex exonuclease RRP46 homolog isoform X1.	0.668
LOC101489670	LOC101500694	A0A1S2YR46	A0A1S2YR58	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.900
LOC101489670	LOC101500832	A0A1S2YR46	A0A1S2XUT9	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Exosome complex component RRP41 homolog isoform X1.	0.567
LOC101489670	LOC101501810	A0A1S2YR46	A0A1S2Y2R8	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Exosome complex component RRP43.	0.630
LOC101489670	LOC101503493	A0A1S2YR46	A0A1S2Z4U9	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Protein RRP6-like 3 isoform X1.	0.525
LOC101489670	LOC101504662	A0A1S2YR46	A0A1S3DZV4	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Putative exosome complex component rrp40.	0.457
LOC101489670	LOC101506177	A0A1S2YR46	A0A1S2XVD5	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Exosome complex component RRP4 homolog.	0.585
LOC101489670	LOC101506570	A0A1S2YR46	A0A1S2YTC3	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	H/ACA ribonucleoprotein complex subunit 3-like protein.	0.991
LOC101489670	LOC101513077	A0A1S2YR46	A0A1S2YK48	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	H/ACA ribonucleoprotein complex subunit 4.	0.889
LOC101489670	LOC101515009	A0A1S2YR46	A0A1S3E3E4	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Exosome complex component RRP45A-like.	0.573
LOC101490361	LOC101492093	A0A1S2XPQ8	A0A3Q7XZK1	Protein SIEL.	Uncharacterized protein LOC101492093.	0.933
LOC101490361	LOC101499865	A0A1S2XPQ8	A0A1S2Z5S5	Protein SIEL.	Integrator complex subunit 9-like isoform X1.	0.988
LOC101490361	LOC101506989	A0A1S2XPQ8	A0A1S2YJ53	Protein SIEL.	Uncharacterized protein LOC101506989 isoform X1.	0.933