17 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101515009	Exosome complex component RRP45A-like. (450 aa)
	LOC101491819	LOW QUALITY PROTEIN: exosome complex component RRP40-like. (149 aa)
	LOC101498997	Protein RRP6-like 2. (880 aa)
	LOC101503493	Protein RRP6-like 3 isoform X1. (894 aa)
	LOC101492954	Protein RRP6-like 2 isoform X1. (709 aa)
	LOC101499023	Exosome complex exonuclease RRP46 homolog isoform X1. (243 aa)
	LOC101514762	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (395 aa)
	LOC101491925	Exosome complex component RRP42-like. (286 aa)
	LOC101500832	Exosome complex component RRP41 homolog isoform X1. (241 aa)
	LOC101506177	Exosome complex component RRP4 homolog. (327 aa)
	LOC101502957	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (379 aa)
	LOC101501810	Exosome complex component RRP43. (302 aa)
	LOC101492547	Exosome complex component RRP42-like. (286 aa)
	LOC101510269	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1091 aa)
	LOC101497104	Exosome complex component RRP41-like. (257 aa)
	LOC101504662	Putative exosome complex component rrp40. (237 aa)
	LOC101496147	Exosome complex exonuclease RRP44 homolog A; Belongs to the RNR ribonuclease family. (950 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101491819	LOC101491925	A0A3Q7XVA3	A0A1S2YSM4	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP42-like.	0.972
LOC101491819	LOC101492547	A0A3Q7XVA3	A0A1S2Y464	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP42-like.	0.972
LOC101491819	LOC101492954	A0A3Q7XVA3	A0A1S2XR27	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Protein RRP6-like 2 isoform X1.	0.946
LOC101491819	LOC101496147	A0A3Q7XVA3	A0A1S3EFL5	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex exonuclease RRP44 homolog A; Belongs to the RNR ribonuclease family.	0.944
LOC101491819	LOC101497104	A0A3Q7XVA3	A0A1S2YK67	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP41-like.	0.975
LOC101491819	LOC101498997	A0A3Q7XVA3	A0A1S2XI21	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Protein RRP6-like 2.	0.946
LOC101491819	LOC101499023	A0A3Q7XVA3	A0A1S2XS35	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex exonuclease RRP46 homolog isoform X1.	0.988
LOC101491819	LOC101500832	A0A3Q7XVA3	A0A1S2XUT9	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP41 homolog isoform X1.	0.975
LOC101491819	LOC101501810	A0A3Q7XVA3	A0A1S2Y2R8	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP43.	0.987
LOC101491819	LOC101503493	A0A3Q7XVA3	A0A1S2Z4U9	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Protein RRP6-like 3 isoform X1.	0.920
LOC101491819	LOC101504662	A0A3Q7XVA3	A0A1S3DZV4	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Putative exosome complex component rrp40.	0.902
LOC101491819	LOC101506177	A0A3Q7XVA3	A0A1S2XVD5	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP4 homolog.	0.992
LOC101491819	LOC101515009	A0A3Q7XVA3	A0A1S3E3E4	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP45A-like.	0.991
LOC101491925	LOC101491819	A0A1S2YSM4	A0A3Q7XVA3	Exosome complex component RRP42-like.	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	0.972
LOC101491925	LOC101492547	A0A1S2YSM4	A0A1S2Y464	Exosome complex component RRP42-like.	Exosome complex component RRP42-like.	0.900
LOC101491925	LOC101492954	A0A1S2YSM4	A0A1S2XR27	Exosome complex component RRP42-like.	Protein RRP6-like 2 isoform X1.	0.918
LOC101491925	LOC101496147	A0A1S2YSM4	A0A1S3EFL5	Exosome complex component RRP42-like.	Exosome complex exonuclease RRP44 homolog A; Belongs to the RNR ribonuclease family.	0.923
LOC101491925	LOC101497104	A0A1S2YSM4	A0A1S2YK67	Exosome complex component RRP42-like.	Exosome complex component RRP41-like.	0.978
LOC101491925	LOC101498997	A0A1S2YSM4	A0A1S2XI21	Exosome complex component RRP42-like.	Protein RRP6-like 2.	0.918
LOC101491925	LOC101499023	A0A1S2YSM4	A0A1S2XS35	Exosome complex component RRP42-like.	Exosome complex exonuclease RRP46 homolog isoform X1.	0.991