32 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101501766	Nucleolar protein 6-like. (1049 aa)
	LOC101502091	Nucleolar protein 6-like. (1052 aa)
	LOC101513454	U3 small nucleolar RNA-associated protein 21 homolog. (910 aa)
	LOC101503158	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (598 aa)
	LOC101510449	Transcriptional regulator ATRX homolog. (288 aa)
	LOC101510150	Uncharacterized protein At3g06530. (1956 aa)
	LOC101492545	Uncharacterized protein At3g06530-like. (1128 aa)
	LOC113788016	U3 small nucleolar RNA-associated protein 21-like. (156 aa)
	LOC101499189	U3 small nucleolar RNA-associated protein 18 homolog. (556 aa)
	LOC101500258	Protein KRI1 homolog. (683 aa)
	LOC101505150	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (723 aa)
	LOC101515273	Nucleolar complex protein 4 homolog isoform X1. (601 aa)
	LOC101504958	Periodic tryptophan protein 2. (884 aa)
	LOC101489245	Ribosomal RNA processing protein 36 homolog. (251 aa)
	LOC101496276	Nucleolar complex protein 4 homolog isoform X1. (614 aa)
	LOC101507143	Nucleolar complex protein 2 homolog isoform X1. (700 aa)
	LOC101510331	Uncharacterized protein LOC101510331. (163 aa)
	LOC101495083	Pumilio homolog 23. (744 aa)
	LOC101506931	Small subunit processome component 20 homolog. (2700 aa)
	LOC101509269	WD repeat-containing protein 3. (901 aa)
	LOC101493420	Nucleolar complex protein 2 homolog. (719 aa)
	LOC101505995	Nucleolar protein 14. (946 aa)
	LOC101512085	U3 small nucleolar ribonucleoprotein protein IMP4. (293 aa)
	LOC101497949	Uncharacterized protein DDB_G0283697-like isoform X1. (334 aa)
	LOC101511568	U3 small nucleolar ribonucleoprotein protein IMP3. (182 aa)
	LOC101490629	Uncharacterized protein LOC101490629. (163 aa)
	LOC101504099	Ribosome biogenesis protein BMS1 homolog isoform X1. (1197 aa)
	LOC101497116	U3 small nucleolar RNA-associated protein 6 homolog. (656 aa)
	LOC101497235	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (663 aa)
	LOC101495596	Transducin beta-like protein 3. (907 aa)
	LOC101497992	U3 small nucleolar ribonucleoprotein protein MPP10 isoform X1. (519 aa)
	LOC101497243	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (604 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101489245	LOC101492545	A0A1S2XJT8	A0A1S2Z975	Ribosomal RNA processing protein 36 homolog.	Uncharacterized protein At3g06530-like.	0.880
LOC101489245	LOC101495083	A0A1S2XJT8	A0A1S2XQ04	Ribosomal RNA processing protein 36 homolog.	Pumilio homolog 23.	0.544
LOC101489245	LOC101495596	A0A1S2XJT8	A0A1S2YRR5	Ribosomal RNA processing protein 36 homolog.	Transducin beta-like protein 3.	0.783
LOC101489245	LOC101496276	A0A1S2XJT8	A0A1S2XKP8	Ribosomal RNA processing protein 36 homolog.	Nucleolar complex protein 4 homolog isoform X1.	0.817
LOC101489245	LOC101497116	A0A1S2XJT8	A0A1S2YP24	Ribosomal RNA processing protein 36 homolog.	U3 small nucleolar RNA-associated protein 6 homolog.	0.986
LOC101489245	LOC101497235	A0A1S2XJT8	A0A1S2YRD1	Ribosomal RNA processing protein 36 homolog.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.476
LOC101489245	LOC101497243	A0A1S2XJT8	A0A1S2YTW3	Ribosomal RNA processing protein 36 homolog.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.476
LOC101489245	LOC101497949	A0A1S2XJT8	A0A1S2Y6S4	Ribosomal RNA processing protein 36 homolog.	Uncharacterized protein DDB_G0283697-like isoform X1.	0.824
LOC101489245	LOC101497992	A0A1S2XJT8	A0A1S2YRS0	Ribosomal RNA processing protein 36 homolog.	U3 small nucleolar ribonucleoprotein protein MPP10 isoform X1.	0.797
LOC101489245	LOC101499189	A0A1S2XJT8	A0A1S2X9I0	Ribosomal RNA processing protein 36 homolog.	U3 small nucleolar RNA-associated protein 18 homolog.	0.985
LOC101489245	LOC101501766	A0A1S2XJT8	A0A1S2YYQ5	Ribosomal RNA processing protein 36 homolog.	Nucleolar protein 6-like.	0.767
LOC101489245	LOC101502091	A0A1S2XJT8	A0A1S2YYT0	Ribosomal RNA processing protein 36 homolog.	Nucleolar protein 6-like.	0.767
LOC101489245	LOC101503158	A0A1S2XJT8	A0A1S2Z2L0	Ribosomal RNA processing protein 36 homolog.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.476
LOC101489245	LOC101504099	A0A1S2XJT8	A0A1S2YN69	Ribosomal RNA processing protein 36 homolog.	Ribosome biogenesis protein BMS1 homolog isoform X1.	0.896
LOC101489245	LOC101504958	A0A1S2XJT8	A0A1S2XEV1	Ribosomal RNA processing protein 36 homolog.	Periodic tryptophan protein 2.	0.765
LOC101489245	LOC101505995	A0A1S2XJT8	A0A1S2Y3D1	Ribosomal RNA processing protein 36 homolog.	Nucleolar protein 14.	0.915
LOC101489245	LOC101506931	A0A1S2XJT8	A0A1S2XRC1	Ribosomal RNA processing protein 36 homolog.	Small subunit processome component 20 homolog.	0.660
LOC101489245	LOC101509269	A0A1S2XJT8	A0A1S2XUA6	Ribosomal RNA processing protein 36 homolog.	WD repeat-containing protein 3.	0.739
LOC101489245	LOC101510150	A0A1S2XJT8	A0A3Q7XTJ5	Ribosomal RNA processing protein 36 homolog.	Uncharacterized protein At3g06530.	0.880
LOC101489245	LOC101510449	A0A1S2XJT8	A0A1S2Z2L3	Ribosomal RNA processing protein 36 homolog.	Transcriptional regulator ATRX homolog.	0.824