21 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101501810	Exosome complex component RRP43. (302 aa)
	LOC101507765	DExH-box ATP-dependent RNA helicase DExH9. (977 aa)
	LOC101488232	40S ribosomal protein S21-2. (113 aa)
	LOC101498997	Protein RRP6-like 2. (880 aa)
	LOC101492954	Protein RRP6-like 2 isoform X1. (709 aa)
	LOC101499023	Exosome complex exonuclease RRP46 homolog isoform X1. (243 aa)
	LOC101500832	Exosome complex component RRP41 homolog isoform X1. (241 aa)
	LOC101506177	Exosome complex component RRP4 homolog. (327 aa)
	LOC101508977	Mediator of RNA polymerase II transcription subunit 36a-like. (308 aa)
	LOC101492547	Exosome complex component RRP42-like. (286 aa)
	LOC101513077	H/ACA ribonucleoprotein complex subunit 4. (580 aa)
	LOC101497104	Exosome complex component RRP41-like. (257 aa)
	LOC101491925	Exosome complex component RRP42-like. (286 aa)
	LOC101495396	3'-5' exoribonuclease 1-like. (422 aa)
	LOC101501336	Uncharacterized exonuclease domain-containing protein At3g15140 isoform X1. (307 aa)
	LOC101507893	DExH-box ATP-dependent RNA helicase DExH9-like. (272 aa)
	LOC101503493	Protein RRP6-like 3 isoform X1. (894 aa)
	LOC101504662	Putative exosome complex component rrp40. (237 aa)
	LOC101515009	Exosome complex component RRP45A-like. (450 aa)
	LOC101491819	LOW QUALITY PROTEIN: exosome complex component RRP40-like. (149 aa)
	LOC101506748	Mediator of RNA polymerase II transcription subunit 36a-like isoform X1. (122 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101488232	LOC101507765	A0A1S2XGW8	A0A1S2XGT0	40S ribosomal protein S21-2.	DExH-box ATP-dependent RNA helicase DExH9.	0.412
LOC101488232	LOC101507893	A0A1S2XGW8	A0A1S2Z3D0	40S ribosomal protein S21-2.	DExH-box ATP-dependent RNA helicase DExH9-like.	0.412
LOC101491819	LOC101491925	A0A3Q7XVA3	A0A1S2YSM4	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP42-like.	0.972
LOC101491819	LOC101492547	A0A3Q7XVA3	A0A1S2Y464	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP42-like.	0.972
LOC101491819	LOC101492954	A0A3Q7XVA3	A0A1S2XR27	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Protein RRP6-like 2 isoform X1.	0.946
LOC101491819	LOC101497104	A0A3Q7XVA3	A0A1S2YK67	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP41-like.	0.975
LOC101491819	LOC101498997	A0A3Q7XVA3	A0A1S2XI21	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Protein RRP6-like 2.	0.946
LOC101491819	LOC101499023	A0A3Q7XVA3	A0A1S2XS35	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex exonuclease RRP46 homolog isoform X1.	0.988
LOC101491819	LOC101500832	A0A3Q7XVA3	A0A1S2XUT9	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP41 homolog isoform X1.	0.975
LOC101491819	LOC101501810	A0A3Q7XVA3	A0A1S2Y2R8	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP43.	0.987
LOC101491819	LOC101503493	A0A3Q7XVA3	A0A1S2Z4U9	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Protein RRP6-like 3 isoform X1.	0.920
LOC101491819	LOC101504662	A0A3Q7XVA3	A0A1S3DZV4	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Putative exosome complex component rrp40.	0.902
LOC101491819	LOC101506177	A0A3Q7XVA3	A0A1S2XVD5	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP4 homolog.	0.992
LOC101491819	LOC101506748	A0A3Q7XVA3	A0A3Q7YB40	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Mediator of RNA polymerase II transcription subunit 36a-like isoform X1.	0.799
LOC101491819	LOC101507765	A0A3Q7XVA3	A0A1S2XGT0	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	DExH-box ATP-dependent RNA helicase DExH9.	0.912
LOC101491819	LOC101507893	A0A3Q7XVA3	A0A1S2Z3D0	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	DExH-box ATP-dependent RNA helicase DExH9-like.	0.912
LOC101491819	LOC101508977	A0A3Q7XVA3	A0A1S2Y075	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Mediator of RNA polymerase II transcription subunit 36a-like.	0.799
LOC101491819	LOC101515009	A0A3Q7XVA3	A0A1S3E3E4	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	Exosome complex component RRP45A-like.	0.991
LOC101491925	LOC101491819	A0A1S2YSM4	A0A3Q7XVA3	Exosome complex component RRP42-like.	LOW QUALITY PROTEIN: exosome complex component RRP40-like.	0.972
LOC101491925	LOC101492547	A0A1S2YSM4	A0A1S2Y464	Exosome complex component RRP42-like.	Exosome complex component RRP42-like.	0.900