59 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101500178	DNA mismatch repair protein MLH3 isoform X1. (1223 aa)
	LOC101506873	Galacturonokinase isoform X1. (437 aa)
	LOC101515009	Exosome complex component RRP45A-like. (450 aa)
	LOC101490659	40S ribosomal protein S16-like isoform X1; Belongs to the universal ribosomal protein uS9 family. (192 aa)
	LOC101510801	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (79 aa)
	LOC101511551	Heat shock protein 83. (699 aa)
	LOC101496196	30S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family. (397 aa)
	LOC101492190	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (772 aa)
	LOC101513028	Heat shock protein 90-5, chloroplastic. (792 aa)
	LOC101511106	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (273 aa)
	LOC101495398	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (888 aa)
	LOC101492041	Uncharacterized protein LOC101492041. (562 aa)
	LOC101493465	Uncharacterized protein LOC101493465. (236 aa)
	LOC101491925	Exosome complex component RRP42-like. (286 aa)
	LOC101506566	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (886 aa)
	LOC101507129	110 kDa U5 small nuclear ribonucleoprotein component CLO. (990 aa)
	LOC101496906	Galactokinase. (497 aa)
	LOC101509758	Elongation factor 2-like. (843 aa)
	LOC101497104	Exosome complex component RRP41-like. (257 aa)
	LOC101508478	40S ribosomal protein S16-like. (99 aa)
	LOC101511461	LOW QUALITY PROTEIN: 30S ribosomal protein S5, chloroplastic; Belongs to the universal ribosomal protein uS5 family. (306 aa)
	LOC101490733	Uncharacterized protein LOC101490733; Belongs to the universal ribosomal protein uS5 family. (503 aa)
	LOC101493001	40S ribosomal protein S2-3-like; Belongs to the universal ribosomal protein uS5 family. (276 aa)
	LOC101512651	40S ribosomal protein S16-like; Belongs to the universal ribosomal protein uS9 family. (140 aa)
	LOC101505793	Phosphomevalonate kinase, peroxisomal. (507 aa)
	LOC101515120	Heat shock cognate protein 80. (699 aa)
	LOC101495557	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1472 aa)
	LOC101503626	DNA mismatch repair protein MLH1. (719 aa)
	LOC101496653	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic. (396 aa)
	LOC101498070	30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family. (203 aa)
	LOC101497414	Endoplasmin homolog isoform X1. (817 aa)
	LOC101505999	L-arabinokinase-like. (996 aa)
	LOC101492547	Exosome complex component RRP42-like. (286 aa)
	LOC101501810	Exosome complex component RRP43. (302 aa)
	LOC101513273	Probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2, mitochondrial isoform X1. (310 aa)
	LOC101512637	40S ribosomal protein S2-4-like; Belongs to the universal ribosomal protein uS5 family. (275 aa)
	LOC101498272	Elongation factor-like GTPase 1. (1027 aa)
	LOC101491864	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (421 aa)
	LOC101490383	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (277 aa)
	LOC101497606	DNA mismatch repair protein PMS1. (939 aa)
	LOC101501799	Homoserine kinase. (373 aa)
	LOC101510578	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (952 aa)
	LOC101500832	Exosome complex component RRP41 homolog isoform X1. (241 aa)
	LOC101489062	Bifunctional fucokinase/fucose pyrophosphorylase. (1048 aa)
	LOC101507487	Mevalonate kinase. (388 aa)
	LOC101504136	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner. (732 aa)
	LOC101499023	Exosome complex exonuclease RRP46 homolog isoform X1. (243 aa)
	LOC101491735	Heat shock cognate protein 80. (699 aa)
	LOC101505628	Heat shock protein 90-6, mitochondrial. (692 aa)
	LOC101490003	Polyribonucleotide nucleotidyltransferase 2, mitochondrial. (976 aa)
	LOC101493895	Elongation factor 2. (843 aa)
	LOC101494529	Elongation factor 2. (843 aa)
	LOC101503341	Glucuronokinase 1. (381 aa)
	LOC101498101	Uncharacterized protein LOC101498101. (596 aa)
	LOC101514181	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (669 aa)
	LOC101494632	Lon protease homolog 2, peroxisomal; Belongs to the peptidase S16 family. (323 aa)
	LOC101508784	40S ribosomal protein S16-like; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	LOC101497377	Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1. (972 aa)
	LOC101491113	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (756 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101490003	LOC101491113	A0A1S2XIV1	A0A1S3EJJ8	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.416
LOC101490003	LOC101492190	A0A1S2XIV1	A0A1S2Z634	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.416
LOC101490003	LOC101493895	A0A1S2XIV1	A0A1S2XIS4	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Elongation factor 2.	0.406
LOC101490003	LOC101494529	A0A1S2XIV1	A0A1S2XI19	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Elongation factor 2.	0.406
LOC101490003	LOC101497104	A0A1S2XIV1	A0A1S2YK67	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Exosome complex component RRP41-like.	0.472
LOC101490003	LOC101497377	A0A1S2XIV1	A0A3Q7Y926	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Probable polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1.	0.912
LOC101490003	LOC101498272	A0A1S2XIV1	A0A1S2Y248	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Elongation factor-like GTPase 1.	0.406
LOC101490003	LOC101499023	A0A1S2XIV1	A0A1S2XS35	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Exosome complex exonuclease RRP46 homolog isoform X1.	0.471
LOC101490003	LOC101500832	A0A1S2XIV1	A0A1S2XUT9	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Exosome complex component RRP41 homolog isoform X1.	0.472
LOC101490003	LOC101507129	A0A1S2XIV1	A0A1S2YQN3	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	110 kDa U5 small nuclear ribonucleoprotein component CLO.	0.409
LOC101490003	LOC101509758	A0A1S2XIV1	A0A1S2YKU2	Polyribonucleotide nucleotidyltransferase 2, mitochondrial.	Elongation factor 2-like.	0.406
LOC101490383	LOC101501799	A0A1S2XZ09	A0A1S2XYL7	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Homoserine kinase.	0.579
LOC101490383	LOC101511106	A0A1S2XZ09	A0A1S2Z2L5	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	0.901
LOC101490659	LOC101490733	A0A1S3DXZ9	A0A1S2YF88	40S ribosomal protein S16-like isoform X1; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein LOC101490733; Belongs to the universal ribosomal protein uS5 family.	0.804
LOC101490659	LOC101491113	A0A1S3DXZ9	A0A1S3EJJ8	40S ribosomal protein S16-like isoform X1; Belongs to the universal ribosomal protein uS9 family.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.670
LOC101490659	LOC101492190	A0A1S3DXZ9	A0A1S2Z634	40S ribosomal protein S16-like isoform X1; Belongs to the universal ribosomal protein uS9 family.	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.670
LOC101490659	LOC101493001	A0A1S3DXZ9	A0A1S2YF29	40S ribosomal protein S16-like isoform X1; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S2-3-like; Belongs to the universal ribosomal protein uS5 family.	0.897
LOC101490659	LOC101493895	A0A1S3DXZ9	A0A1S2XIS4	40S ribosomal protein S16-like isoform X1; Belongs to the universal ribosomal protein uS9 family.	Elongation factor 2.	0.816
LOC101490659	LOC101494529	A0A1S3DXZ9	A0A1S2XI19	40S ribosomal protein S16-like isoform X1; Belongs to the universal ribosomal protein uS9 family.	Elongation factor 2.	0.816
LOC101490659	LOC101496196	A0A1S3DXZ9	A0A1S2Z6I3	40S ribosomal protein S16-like isoform X1; Belongs to the universal ribosomal protein uS9 family.	30S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.	0.839