47 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101496446	Replication factor C subunit 2. (341 aa)
	LOC101510394	Replication factor C subunit 3. (363 aa)
	NAC41	Uncharacterized protein NAC41. (612 aa)
	LOC101498627	Protein STICHEL-like 2. (927 aa)
	LOC101514289	Protein STICHEL-like 3. (1167 aa)
	LOC101497695	Replication factor C subunit 3. (354 aa)
	LOC101491004	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (628 aa)
	LOC101501154	Protein NTM1-like 9. (610 aa)
	LOC101510692	Replication factor C subunit 2. (332 aa)
	LOC101496307	Protein STICHEL-like 2. (921 aa)
	LOC101502235	Uncharacterized protein LOC101502235. (312 aa)
	LOC101514899	DNA damage-binding protein 1-like. (346 aa)
	LOC101515379	Denticleless protein homolog. (509 aa)
	LOC101493733	Uncharacterized protein LOC101493733 isoform X1. (1030 aa)
	LOC101505338	Replication factor C subunit 3-like. (354 aa)
	LOC101495489	NAC domain-containing protein 40. (561 aa)
	LOC101503457	LOW QUALITY PROTEIN: NAC domain-containing protein 69-like. (435 aa)
	LOC101489902	DNA damage-binding protein 1-like. (292 aa)
	UBQ5	Ubiquitin 5. (155 aa)
	LOC113783929	Uncharacterized protein LOC113783929 isoform X1. (299 aa)
	LOC101511822	Denticleless protein homolog isoform X1. (392 aa)
	LOC101512477	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (917 aa)
	LOC113786127	DNA polymerase delta subunit 4-like. (104 aa)
	LOC113787727	Replication protein A 70 kDa DNA-binding subunit E-like. (233 aa)
	LOC101507562	Uncharacterized protein LOC101507562. (753 aa)
	LOC113786178	Protein CUP-SHAPED COTYLEDON 3-like. (279 aa)
	LOC101491458	Uncharacterized protein LOC101491458. (715 aa)
	LOC101491991	Uncharacterized protein LOC101491991 isoform X1. (1232 aa)
	LOC101508463	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (266 aa)
	LOC101493429	Protein STICHEL. (1190 aa)
	LOC101511766	Uncharacterized protein LOC101511766 isoform X1. (1188 aa)
	LOC101515431	Denticleless protein homolog isoform X1. (339 aa)
	LOC101488963	WD repeat-containing protein 48-like. (761 aa)
	LOC101491434	WD repeat-containing protein 48 isoform X1. (767 aa)
	NAC26	NAC domain-containing protein 21/22. (291 aa)
	LOC101494112	ubiquitin-40S ribosomal protein S27a. (155 aa)
	LOC101512663	LOW QUALITY PROTEIN: cullin-4; Belongs to the cullin family. (787 aa)
	LOC101512677	Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses. (617 aa)
	LOC101498446	Putative F-box protein At1g67623. (245 aa)
	LOC101497457	F-box protein At5g50450-like. (247 aa)
	LOC101497788	Putative F-box protein At1g67623. (252 aa)
	LOC101498108	Putative F-box protein At1g67623. (252 aa)
	LOC101513194	Replication factor C subunit 1. (997 aa)
	LOC101491905	DNA polymerase epsilon subunit 3. (133 aa)
	LOC101514286	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2212 aa)
	LOC101504287	DNA polymerase delta subunit 4. (115 aa)
	LOC101506983	DNA damage-binding protein 1 isoform X2. (1088 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101488963	LOC101489902	A0A1S2XY64	A0A1S3EGX2	WD repeat-containing protein 48-like.	DNA damage-binding protein 1-like.	0.474
LOC101488963	LOC101491458	A0A1S2XY64	A0A1S2Y7Q5	WD repeat-containing protein 48-like.	Uncharacterized protein LOC101491458.	0.470
LOC101488963	LOC101491905	A0A1S2XY64	A0A1S2YKK3	WD repeat-containing protein 48-like.	DNA polymerase epsilon subunit 3.	0.615
LOC101488963	LOC101491991	A0A1S2XY64	A0A1S2Y7A5	WD repeat-containing protein 48-like.	Uncharacterized protein LOC101491991 isoform X1.	0.648
LOC101488963	LOC101493429	A0A1S2XY64	A0A1S2Y4R4	WD repeat-containing protein 48-like.	Protein STICHEL.	0.490
LOC101488963	LOC101494112	A0A1S2XY64	A0A1S2XK07	WD repeat-containing protein 48-like.	ubiquitin-40S ribosomal protein S27a.	0.774
LOC101488963	LOC101496307	A0A1S2XY64	A0A1S2Z6D2	WD repeat-containing protein 48-like.	Protein STICHEL-like 2.	0.490
LOC101488963	LOC101496446	A0A1S2XY64	A0A1S2YCY3	WD repeat-containing protein 48-like.	Replication factor C subunit 2.	0.490
LOC101488963	LOC101497695	A0A1S2XY64	A0A1S2Z0B5	WD repeat-containing protein 48-like.	Replication factor C subunit 3.	0.470
LOC101488963	LOC101498627	A0A1S2XY64	A0A1S2YAA1	WD repeat-containing protein 48-like.	Protein STICHEL-like 2.	0.490
LOC101488963	LOC101505338	A0A1S2XY64	A0A1S3E4R2	WD repeat-containing protein 48-like.	Replication factor C subunit 3-like.	0.470
LOC101488963	LOC101506983	A0A1S2XY64	A0A1S2YFR8	WD repeat-containing protein 48-like.	DNA damage-binding protein 1 isoform X2.	0.474
LOC101488963	LOC101507562	A0A1S2XY64	A0A3Q7Y4B7	WD repeat-containing protein 48-like.	Uncharacterized protein LOC101507562.	0.470
LOC101488963	LOC101508463	A0A1S2XY64	A0A1S2Y6L1	WD repeat-containing protein 48-like.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.643
LOC101488963	LOC101510394	A0A1S2XY64	A0A1S2YCV4	WD repeat-containing protein 48-like.	Replication factor C subunit 3.	0.672
LOC101488963	LOC101510692	A0A1S2XY64	A0A1S2Z697	WD repeat-containing protein 48-like.	Replication factor C subunit 2.	0.667
LOC101488963	LOC101511766	A0A1S2XY64	A0A1S2Y4B4	WD repeat-containing protein 48-like.	Uncharacterized protein LOC101511766 isoform X1.	0.648
LOC101488963	LOC101512663	A0A1S2XY64	A0A1S2XA27	WD repeat-containing protein 48-like.	LOW QUALITY PROTEIN: cullin-4; Belongs to the cullin family.	0.592
LOC101488963	LOC101513194	A0A1S2XY64	A0A1S2YKQ5	WD repeat-containing protein 48-like.	Replication factor C subunit 1.	0.648
LOC101488963	LOC101514286	A0A1S2XY64	A0A1S2YK49	WD repeat-containing protein 48-like.	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.	0.593