9 items (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101514007	Peroxiredoxin-like 2A. (155 aa)
	LOC101499318	Co-chaperone protein p23-2. (151 aa)
	LOC101512168	Uncharacterized protein OsI_027940-like isoform X1. (215 aa)
	LOC101510451	Thioredoxin-like protein AAED1, chloroplastic. (258 aa)
	LOC101496520	Uncharacterized protein OsI_027940-like. (186 aa)
	LOC101502564	Prostaglandin E synthase 2-like. (318 aa)
	LOC101502495	Prostamide/prostaglandin F synthase. (251 aa)
	LOC101491202	Prostaglandin E synthase 2-like. (323 aa)
	LOC101511493	Peroxiredoxin-like 2A. (99 aa)

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101491202	LOC101496520	A0A1S2Z098	A0A1S2XX99	Prostaglandin E synthase 2-like.	Uncharacterized protein OsI_027940-like.	0.929
LOC101491202	LOC101502564	A0A1S2Z098	A0A1S2Y891	Prostaglandin E synthase 2-like.	Prostaglandin E synthase 2-like.	0.902
LOC101496520	LOC101491202	A0A1S2XX99	A0A1S2Z098	Uncharacterized protein OsI_027940-like.	Prostaglandin E synthase 2-like.	0.929
LOC101496520	LOC101502564	A0A1S2XX99	A0A1S2Y891	Uncharacterized protein OsI_027940-like.	Prostaglandin E synthase 2-like.	0.929
LOC101502564	LOC101491202	A0A1S2Y891	A0A1S2Z098	Prostaglandin E synthase 2-like.	Prostaglandin E synthase 2-like.	0.902
LOC101502564	LOC101496520	A0A1S2Y891	A0A1S2XX99	Prostaglandin E synthase 2-like.	Uncharacterized protein OsI_027940-like.	0.929