STRINGSTRING
SPRI_1434 SPRI_1434 SPRI_1435 SPRI_1435 SPRI_1436 SPRI_1436 SPRI_1437 SPRI_1437 SPRI_1438 SPRI_1438 SPRI_3453 SPRI_3453 SPRI_3454 SPRI_3454 SPRI_3455 SPRI_3455 SPRI_4430 SPRI_4430 SPRI_4431 SPRI_4431 SPRI_4459 SPRI_4459 SPRI_4460 SPRI_4460 SPRI_5298 SPRI_5298 SPRI_5299 SPRI_5299 SPRI_5300 SPRI_5300 SPRI_6441 SPRI_6441 SPRI_6442 SPRI_6442 SPRI_6443 SPRI_6443 SPRI_6444 SPRI_6444 SPRI_6445 SPRI_6445
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_1434ABC transport system ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (121 aa)
SPRI_1435ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (366 aa)
SPRI_1436Histidine kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (397 aa)
SPRI_1437LuxR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (213 aa)
SPRI_1438Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (57 aa)
SPRI_3453Aromatic acid decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (380 aa)
SPRI_3454ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (241 aa)
SPRI_3455ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (716 aa)
SPRI_4430Peptide ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (262 aa)
SPRI_4431Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (856 aa)
SPRI_4459ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (845 aa)
SPRI_4460Peptide ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (256 aa)
SPRI_5298ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (375 aa)
SPRI_5299ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (238 aa)
SPRI_5300TetR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (203 aa)
SPRI_6441Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (193 aa)
SPRI_6442TetR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (190 aa)
SPRI_6443Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (94 aa)
SPRI_6444Peptide ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (261 aa)
SPRI_6445ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (856 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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