STRINGSTRING
SPRI_2411 SPRI_2411 SPRI_2412 SPRI_2412 SPRI_2413 SPRI_2413 SPRI_2414 SPRI_2414 SPRI_3710 SPRI_3710 SPRI_3711 SPRI_3711 SPRI_3712 SPRI_3712 SPRI_3713 SPRI_3713
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_2411ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (591 aa)
SPRI_2412ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (752 aa)
SPRI_2413Lanthionine-containing peptide SapB; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (42 aa)
SPRI_2414Serine/threonine protein kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (873 aa)
SPRI_3710Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (191 aa)
SPRI_3711Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (214 aa)
SPRI_3712ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (253 aa)
SPRI_3713Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (954 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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