STRINGSTRING
SPRI_5140 SPRI_5140 SPRI_5141 SPRI_5141 SPRI_5142 SPRI_5142 cbiD cbiD SPRI_5145 SPRI_5145 SPRI_5146 SPRI_5146 SPRI_6009 SPRI_6009
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_5140precorrin-8X methylmutase CbiC/CobH; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (208 aa)
SPRI_5141precorrin-3B C17-methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (519 aa)
SPRI_5142cobalt-precorrin-6X reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (246 aa)
cbiDcobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (374 aa)
SPRI_5145Precorrin-4 C11-methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family. (250 aa)
SPRI_5146precorrin-6Y methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (412 aa)
SPRI_6009Methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (416 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.