STRINGSTRING
SPRI_3412 SPRI_3412 SPRI_3413 SPRI_3413 SPRI_3414 SPRI_3414 SPRI_3415 SPRI_3415 SPRI_3416 SPRI_3416
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_3412Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (365 aa)
SPRI_3413Amino acid ABC transporter amino acid-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (333 aa)
SPRI_3414ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (226 aa)
SPRI_3415ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (237 aa)
SPRI_3416ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (402 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.