STRINGSTRING
panD panD SPRI_1346 SPRI_1346 SPRI_2085 SPRI_2085 SPRI_2689 SPRI_2689 coaA coaA SPRI_3395 SPRI_3395 SPRI_3397 SPRI_3397 SPRI_3398 SPRI_3398 SPRI_3399 SPRI_3399 coaX coaX SPRI_3401 SPRI_3401 SPRI_3402 SPRI_3402 panC panC SPRI_3404 SPRI_3404 SPRI_3405 SPRI_3405 panB panB nadE nadE nadA nadA SPRI_5759 SPRI_5759 SPRI_6091 SPRI_6091
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
panDAspartate decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (140 aa)
SPRI_1346NAD-dependent deacetylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (248 aa)
SPRI_2085DNA hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (254 aa)
SPRI_2689NUDIX hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (316 aa)
coaAPantothenate kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (331 aa)
SPRI_3395Lsr2-like protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (111 aa)
SPRI_3397Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (119 aa)
SPRI_3398Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (57 aa)
SPRI_3399Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (197 aa)
coaXPantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. (265 aa)
SPRI_3401Nicotinate-nucleotide pyrophosphorylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family. (334 aa)
SPRI_3402Aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (570 aa)
panCPantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (348 aa)
SPRI_3404NADH-ubiquinone oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (306 aa)
SPRI_3405L-allo-threonine aldolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (426 aa)
panB3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family. (286 aa)
nadENAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (585 aa)
nadAQuinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (395 aa)
SPRI_5759Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (356 aa)
SPRI_6091DNA/pantothenate metabolism flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (410 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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