STRINGSTRING
SPRI_0080 SPRI_0080 SPRI_0364 SPRI_0364 SPRI_0367 SPRI_0367 SPRI_0486 SPRI_0486 SPRI_0487 SPRI_0487 SPRI_0565 SPRI_0565 SPRI_0566 SPRI_0566 SPRI_0567 SPRI_0567 SPRI_0568 SPRI_0568 SPRI_0569 SPRI_0569 SPRI_0571 SPRI_0571 SPRI_0572 SPRI_0572 SPRI_0844 SPRI_0844 SPRI_0903 SPRI_0903 SPRI_0910 SPRI_0910 SPRI_0957 SPRI_0957 SPRI_1121 SPRI_1121 xylB xylB xylA xylA rbsD rbsD SPRI_1220 SPRI_1220 rbsA rbsA SPRI_1222 SPRI_1222 SPRI_1249 SPRI_1249 SPRI_1250 SPRI_1250 SPRI_1251 SPRI_1251 SPRI_1381 SPRI_1381 SPRI_1383 SPRI_1383 SPRI_1412 SPRI_1412 SPRI_1413 SPRI_1413 SPRI_1414 SPRI_1414 SPRI_1415 SPRI_1415 SPRI_1416 SPRI_1416 SPRI_1417 SPRI_1417 SPRI_1418 SPRI_1418 SPRI_1419 SPRI_1419 SPRI_1490 SPRI_1490 SPRI_1491 SPRI_1491 SPRI_1804 SPRI_1804 SPRI_1805 SPRI_1805 SPRI_1806 SPRI_1806 SPRI_1807 SPRI_1807 SPRI_1864 SPRI_1864 SPRI_1869 SPRI_1869 SPRI_1875 SPRI_1875 SPRI_2071 SPRI_2071 SPRI_2333 SPRI_2333 SPRI_2592 SPRI_2592 SPRI_3841 SPRI_3841 SPRI_3843 SPRI_3843 SPRI_4202 SPRI_4202 SPRI_4556 SPRI_4556 SPRI_4685 SPRI_4685 SPRI_4691 SPRI_4691 SPRI_4719 SPRI_4719 SPRI_4742 SPRI_4742 SPRI_4816 SPRI_4816 SPRI_4817 SPRI_4817 SPRI_4818 SPRI_4818 SPRI_4819 SPRI_4819 SPRI_4820 SPRI_4820 SPRI_5045 SPRI_5045 SPRI_5046 SPRI_5046 SPRI_5047 SPRI_5047 SPRI_5048 SPRI_5048 SPRI_6487 SPRI_6487 SPRI_6488 SPRI_6488 SPRI_6489 SPRI_6489 SPRI_6490 SPRI_6490 SPRI_6491 SPRI_6491 rbsA-2 rbsA-2 SPRI_6493 SPRI_6493 SPRI_6494 SPRI_6494 SPRI_6495 SPRI_6495 SPRI_6498 SPRI_6498 SPRI_6499 SPRI_6499 SPRI_6500 SPRI_6500 SPRI_6508 SPRI_6508 SPRI_6509 SPRI_6509 SPRI_6510 SPRI_6510 SPRI_6511 SPRI_6511 SPRI_7273 SPRI_7273 SPRI_7277 SPRI_7277
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_0080LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (338 aa)
SPRI_0364Putative secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (421 aa)
SPRI_0367LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (340 aa)
SPRI_0486GlcNAc-PI de-N-acetylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (247 aa)
SPRI_0487Alpha/beta hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (433 aa)
SPRI_0565LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (395 aa)
SPRI_0566ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (349 aa)
SPRI_0567ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (323 aa)
SPRI_0568ABC sugar transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (618 aa)
SPRI_0569LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (361 aa)
SPRI_0571phytanoyl-CoA dioxygenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (295 aa)
SPRI_0572LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (339 aa)
SPRI_0844LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (346 aa)
SPRI_0903LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (339 aa)
SPRI_0910Xylulose kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. (502 aa)
SPRI_0957LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (373 aa)
SPRI_1121Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (423 aa)
xylBXylulose kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (491 aa)
xylAXylose isomerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the xylose isomerase family. (389 aa)
rbsDRibose ABC transporter; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (130 aa)
SPRI_1220Transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (655 aa)
rbsASugar ABC transporter ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (513 aa)
SPRI_1222LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (344 aa)
SPRI_1249Sugar ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (348 aa)
SPRI_1250ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (344 aa)
SPRI_1251Sugar ABC transporter ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (504 aa)
SPRI_1381Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (148 aa)
SPRI_1383MBL fold metallo-hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (210 aa)
SPRI_1412Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (193 aa)
SPRI_1413Glucokinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (388 aa)
SPRI_1414Sugar ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (275 aa)
SPRI_1415Ribose ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (353 aa)
SPRI_1416ABC transporter sugar-binding lipoprotein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (337 aa)
SPRI_1417Sugar ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (332 aa)
SPRI_1418GntR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (257 aa)
SPRI_1419Dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (334 aa)
SPRI_1490Crp/Fnr family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (95 aa)
SPRI_1491Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (450 aa)
SPRI_1804ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (429 aa)
SPRI_1805ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (262 aa)
SPRI_1806ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (370 aa)
SPRI_1807Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (399 aa)
SPRI_1864LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (349 aa)
SPRI_1869LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (344 aa)
SPRI_1875LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (341 aa)
SPRI_2071LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (323 aa)
SPRI_2333LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (326 aa)
SPRI_2592Pentapeptide repeats domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (267 aa)
SPRI_3841Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (276 aa)
SPRI_3843Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (342 aa)
SPRI_4202Dimethylmenaquinone methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (956 aa)
SPRI_4556Glutamine amidotransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (188 aa)
SPRI_4685ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (363 aa)
SPRI_4691Oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (363 aa)
SPRI_4719Sugar operon repressor; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (352 aa)
SPRI_4742LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (348 aa)
SPRI_4816IolE protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (303 aa)
SPRI_4817Sugar kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (379 aa)
SPRI_4818Deoxyribose-phosphate aldolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (294 aa)
SPRI_4819Myo-inositol catabolism protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (274 aa)
SPRI_48203D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (624 aa)
SPRI_5045Multidrug ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (640 aa)
SPRI_5046ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (589 aa)
SPRI_5047Sugar kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. (481 aa)
SPRI_5048Secreted protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (99 aa)
SPRI_6487LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (342 aa)
SPRI_6488L-rhamnose mutarotase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (106 aa)
SPRI_6489Sugar ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (361 aa)
SPRI_6490ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (343 aa)
SPRI_6491Putative ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (351 aa)
rbsA-2Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (509 aa)
SPRI_6493Putative sugar isomerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (388 aa)
SPRI_6494Putative oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (681 aa)
SPRI_6495Carbohydrate kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (499 aa)
SPRI_6498Fe-S oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (255 aa)
SPRI_6499Iron-sulfur cluster binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (533 aa)
SPRI_6500Lactate utilization protein B/C; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (209 aa)
SPRI_6508Sugar ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (337 aa)
SPRI_6509ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (331 aa)
SPRI_6510Sugar ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (278 aa)
SPRI_6511LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (347 aa)
SPRI_7273LacI family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (338 aa)
SPRI_7277Beta-glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (482 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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