STRINGSTRING
SPRI_0414 SPRI_0414 SPRI_1371 SPRI_1371 SPRI_1619 SPRI_1619 SPRI_2209 SPRI_2209 SPRI_2466 SPRI_2466 ackA ackA SPRI_3436 SPRI_3436 SPRI_3441 SPRI_3441 acsA acsA SPRI_3570 SPRI_3570 SPRI_4258 SPRI_4258 SPRI_4444 SPRI_4444 SPRI_4821 SPRI_4821 SPRI_5055 SPRI_5055 SPRI_5176 SPRI_5176 SPRI_5835 SPRI_5835 SPRI_5836 SPRI_5836 SPRI_6474 SPRI_6474 ackA-2 ackA-2 SPRI_6629 SPRI_6629 SPRI_6631 SPRI_6631 SPRI_6848 SPRI_6848
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_0414Aldehyde dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (486 aa)
SPRI_1371Aminotransferase class III; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)
SPRI_1619Pyruvate dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (575 aa)
SPRI_22094-aminobutyrate aminotransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
SPRI_2466Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (711 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (416 aa)
SPRI_3436Glutamate decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the group II decarboxylase family. (474 aa)
SPRI_3441Aldehyde dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (485 aa)
acsAacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (651 aa)
SPRI_35704-aminobutyrate aminotransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)
SPRI_4258pimeloyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (743 aa)
SPRI_4444Alpha/beta hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (289 aa)
SPRI_4821Methylmalonic semialdehyde dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (500 aa)
SPRI_5055acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (481 aa)
SPRI_5176Aldehyde dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (486 aa)
SPRI_5835Aldehyde dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (464 aa)
SPRI_5836Alcohol dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (359 aa)
SPRI_6474Aldehyde dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (480 aa)
ackA-2Hypothetical protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (383 aa)
SPRI_6629Phosphoketolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (774 aa)
SPRI_6631Thiamine pyrophosphate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (613 aa)
SPRI_68483-hydroxyisobutyrate dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (284 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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