STRINGSTRING
SPRI_1733 SPRI_1733 SPRI_2212 SPRI_2212 SPRI_2213 SPRI_2213 SPRI_2214 SPRI_2214 SPRI_2215 SPRI_2215 potA potA SPRI_2217 SPRI_2217 SPRI_2218 SPRI_2218 SPRI_2219 SPRI_2219 SPRI_5816 SPRI_5816 SPRI_6127 SPRI_6127
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_1733GTP cyclohydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (381 aa)
SPRI_2212Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (142 aa)
SPRI_2213FAD-dependent oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (470 aa)
SPRI_2214ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (265 aa)
SPRI_2215ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (309 aa)
potASpermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (383 aa)
SPRI_2217ABC transporter substrate-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (415 aa)
SPRI_2218Gamma-aminobutyraldehyde dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (504 aa)
SPRI_2219Protein T24A6.7; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (194 aa)
SPRI_5816ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (367 aa)
SPRI_6127Putative CbxX/CfqX family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (631 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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