(19 nodes) Glycoside transport, and Daunorubicin resistance ABC transporter ATP-binding subunit DrrA network (Streptomyces pristinaespiralis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	c101_11c	Putative ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (285 aa)
	c101_12c	Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (337 aa)
	SPRI_2924	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (284 aa)
	SPRI_2925	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (337 aa)
	SPRI_3152	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (269 aa)
	SPRI_3153	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (344 aa)
	SPRI_3672	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (285 aa)
	SPRI_3673	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (322 aa)
	SPRI_3674	Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (133 aa)
	SPRI_4195	TetR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (253 aa)
	SPRI_4196	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (319 aa)
	SPRI_4197	ABC transport system integral membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (277 aa)
	SPRI_5252	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (276 aa)
	SPRI_5253	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (333 aa)
	SPRI_5821	Multidrug ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (258 aa)
	SPRI_5822	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (314 aa)
	SPRI_5823	TetR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (234 aa)
	SPRI_7116	Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (337 aa)
	SPRI_7117	Putative ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (285 aa)

Your Current Organism:

Streptomyces pristinaespiralis

NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRI_2924	SPRI_2925	SPRI_2924	SPRI_2925	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.961
SPRI_2924	SPRI_3152	SPRI_2924	SPRI_3152	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.465
SPRI_2924	SPRI_3153	SPRI_2924	SPRI_3153	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.835
SPRI_2924	SPRI_3672	SPRI_2924	SPRI_3672	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.495
SPRI_2924	SPRI_3673	SPRI_2924	SPRI_3673	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.833
SPRI_2924	SPRI_4196	SPRI_2924	SPRI_4196	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.835
SPRI_2924	SPRI_4197	SPRI_2924	SPRI_4197	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transport system integral membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.435
SPRI_2924	SPRI_5252	SPRI_2924	SPRI_5252	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.482
SPRI_2924	SPRI_5253	SPRI_2924	SPRI_5253	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.835
SPRI_2924	SPRI_5821	SPRI_2924	SPRI_5821	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.423
SPRI_2924	SPRI_5822	SPRI_2924	SPRI_5822	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.835
SPRI_2924	SPRI_7116	SPRI_2924	SPRI_7116	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.835
SPRI_2924	c101_11c	SPRI_2924	SPRI_0236	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Putative ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.432
SPRI_2924	c101_12c	SPRI_2924	SPRI_0237	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.835
SPRI_2925	SPRI_2924	SPRI_2925	SPRI_2924	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.961
SPRI_2925	SPRI_3152	SPRI_2925	SPRI_3152	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.832
SPRI_2925	SPRI_3672	SPRI_2925	SPRI_3672	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.792
SPRI_2925	SPRI_4197	SPRI_2925	SPRI_4197	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transport system integral membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.829
SPRI_2925	SPRI_5252	SPRI_2925	SPRI_5252	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.833
SPRI_2925	SPRI_5821	SPRI_2925	SPRI_5821	Daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Multidrug ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.837