STRINGSTRING
SPRI_1739 SPRI_1739 SPRI_1740 SPRI_1740 SPRI_2499 SPRI_2499 SPRI_2500 SPRI_2500 SPRI_2501 SPRI_2501 SPRI_2502 SPRI_2502 SPRI_5594 SPRI_5594 SPRI_5595 SPRI_5595 SPRI_6346 SPRI_6346 SPRI_6347 SPRI_6347 SPRI_6348 SPRI_6348 SPRI_6349 SPRI_6349
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_1739ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (279 aa)
SPRI_1740ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (302 aa)
SPRI_2499Multidrug ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (332 aa)
SPRI_2500ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (259 aa)
SPRI_2501ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (394 aa)
SPRI_2502ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (275 aa)
SPRI_5594ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (303 aa)
SPRI_5595ABC transporter permease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (304 aa)
SPRI_6346Multidrug ABC transporter ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (593 aa)
SPRI_6347ABC transporter transmembrane subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (617 aa)
SPRI_6348MarR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (148 aa)
SPRI_6349Multidrug ABC transporter ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (602 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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