STRINGSTRING
SPRI_2419 SPRI_2419 SPRI_2420 SPRI_2420 SPRI_2421 SPRI_2421 SPRI_2422 SPRI_2422 SPRI_2423 SPRI_2423 SPRI_2424 SPRI_2424
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_2419LuxR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (218 aa)
SPRI_2420Histidine kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (434 aa)
SPRI_2421Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (262 aa)
SPRI_2422Sulfate ABC transporter ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (300 aa)
SPRI_2423ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (647 aa)
SPRI_2424ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (663 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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