STRINGSTRING
SPRI_0301 SPRI_0301 pglC pglC SPRI_3704 SPRI_3704 SPRI_3703 SPRI_3703 SPRI_2599 SPRI_2599 pglB pglB SPRI_7163 SPRI_7163 SPRI_7162 SPRI_7162 SPRI_7052 SPRI_7052 SPRI_5316 SPRI_5316 SPRI_5102 SPRI_5102 SPRI_3721 SPRI_3721 SPRI_3720 SPRI_3720
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_0301Branched-chain alpha-keto acid decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (676 aa)
pglC2-oxoisovalerate dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (346 aa)
SPRI_3704Pyruvate dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (383 aa)
SPRI_37032-oxoisovalerate dehydrogenase subunit beta; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (326 aa)
SPRI_2599Alpha-ketoglutarate decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (1272 aa)
pglBPyruvate dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (352 aa)
SPRI_71632-oxoisovalerate dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (346 aa)
SPRI_7162Pyruvate dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (352 aa)
SPRI_7052Branched-chain alpha-keto acid decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (676 aa)
SPRI_5316Pyruvate dehydrogenase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (889 aa)
SPRI_5102Pyruvate dehydrogenase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (913 aa)
SPRI_37213-methyl-2-oxobutanoate dehydrogenase subunit E1-alpha; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (385 aa)
SPRI_37202-oxoisovalerate dehydrogenase subunit beta; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (334 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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