STRINGSTRING
SPRI_0117 SPRI_0117 SPRI_0158 SPRI_0158 SPRI_0177 SPRI_0177 SPRI_0184 SPRI_0184 SPRI_0279 SPRI_0279 SPRI_0282 SPRI_0282 papR1 papR1 papR4 papR4 SPRI_0536 SPRI_0536 SPRI_0752 SPRI_0752 SPRI_0841 SPRI_0841 SPRI_0893 SPRI_0893 SPRI_0963 SPRI_0963 SPRI_1127 SPRI_1127 SPRI_1292 SPRI_1292 SPRI_1383 SPRI_1383 SPRI_1401 SPRI_1401 SPRI_1434 SPRI_1434 SPRI_1577 SPRI_1577 SPRI_1639 SPRI_1639 SPRI_1661 SPRI_1661 SPRI_1760 SPRI_1760 SPRI_1870 SPRI_1870 SPRI_2036 SPRI_2036 SPRI_2794 SPRI_2794 SPRI_2834 SPRI_2834 SPRI_3453 SPRI_3453 SPRI_3454 SPRI_3454 SPRI_3712 SPRI_3712 SPRI_4120 SPRI_4120 SPRI_4122 SPRI_4122 SPRI_4161 SPRI_4161 SPRI_4218 SPRI_4218 SPRI_4298 SPRI_4298 SPRI_4430 SPRI_4430 SPRI_4460 SPRI_4460 SPRI_4842 SPRI_4842 SPRI_4861 SPRI_4861 SPRI_5134 SPRI_5134 SPRI_5248 SPRI_5248 SPRI_5299 SPRI_5299 SPRI_5437 SPRI_5437 SPRI_5632 SPRI_5632 SPRI_5730 SPRI_5730 SPRI_5815 SPRI_5815 SPRI_5995 SPRI_5995 SPRI_6444 SPRI_6444 SPRI_6683 SPRI_6683 SPRI_6763 SPRI_6763 SPRI_6924 SPRI_6924 SPRI_6941 SPRI_6941 SPRI_7035 SPRI_7035 SPRI_7051 SPRI_7051 SPRI_7071 SPRI_7071 SPRI_7074 SPRI_7074 SPRI_7169 SPRI_7169 SPRI_7176 SPRI_7176 SPRI_7195 SPRI_7195 SPRI_7236 SPRI_7236
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_0117Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (542 aa)
SPRI_0158Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (394 aa)
SPRI_0177Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (343 aa)
SPRI_0184Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the transposase 2 family. (401 aa)
SPRI_0279Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (394 aa)
SPRI_0282SARP-type regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (273 aa)
papR1Regulatory protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (285 aa)
papR4SARP-type regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (300 aa)
SPRI_0536MBL fold metallo-hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (289 aa)
SPRI_0752MBL fold metallo-hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (349 aa)
SPRI_0841Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (962 aa)
SPRI_0893Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (543 aa)
SPRI_0963Metallo-beta-lactamase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (409 aa)
SPRI_1127Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (542 aa)
SPRI_1292Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (260 aa)
SPRI_1383MBL fold metallo-hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (210 aa)
SPRI_1401SARP family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (255 aa)
SPRI_1434ABC transport system ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (121 aa)
SPRI_1577Oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (209 aa)
SPRI_1639Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (542 aa)
SPRI_1661Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (59 aa)
SPRI_1760ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (275 aa)
SPRI_1870Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (542 aa)
SPRI_2036ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (242 aa)
SPRI_2794Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (264 aa)
SPRI_2834Macrolide ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (228 aa)
SPRI_3453Aromatic acid decarboxylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (380 aa)
SPRI_3454ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (241 aa)
SPRI_3712ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (253 aa)
SPRI_4120Peptide ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (230 aa)
SPRI_4122Peptidase C14; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (1470 aa)
SPRI_4161ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (235 aa)
SPRI_4218HNH endonuclease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (302 aa)
SPRI_4298Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (552 aa)
SPRI_4430Peptide ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (262 aa)
SPRI_4460Peptide ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (256 aa)
SPRI_4842ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (316 aa)
SPRI_4861Endonuclease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (197 aa)
SPRI_5134NADP oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (211 aa)
SPRI_5248Oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (239 aa)
SPRI_5299ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (238 aa)
SPRI_5437Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (542 aa)
SPRI_5632Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (556 aa)
SPRI_5730HNH nuclease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (170 aa)
SPRI_5815Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (542 aa)
SPRI_5995SARP family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (445 aa)
SPRI_6444Peptide ABC transporter ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (261 aa)
SPRI_6683Zn-dependent hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (263 aa)
SPRI_6763NADP oxidoreductase coenzyme F420-dependent protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (230 aa)
SPRI_6924Membrane protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (218 aa)
SPRI_6941Nuclease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (287 aa)
SPRI_7035SARP-type regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (300 aa)
SPRI_7051Regulatory protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (285 aa)
SPRI_7071SARP-type regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (273 aa)
SPRI_7074Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (394 aa)
SPRI_7169Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (401 aa)
SPRI_7176Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (343 aa)
SPRI_7195Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (394 aa)
SPRI_7236Transposase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (542 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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