(23 nodes) Phosphopantetheine binding ACP domain network (Streptomyces pristinaespiralis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPRI_0139	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (1819 aa)
	SPRI_0155	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (85 aa)
	SPRI_0186	PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2561 aa)
	SPRI_0193	PI synthetase 3 and 4; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (4848 aa)
	SPRI_0194	Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2591 aa)
	SPRI_0229	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (87 aa)
	c106_05c	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (87 aa)
	c106_07c	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (90 aa)
	cpp17	Putative acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (84 aa)
	cpp5	Putative acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (87 aa)
	snaX	Isochorismatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (94 aa)
	snaE4	Hybrid NRPS/PKS (PKSIV); Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2686 aa)
	SPRI_0293	Hybrid PKS/NRPS (PKSI); Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2317 aa)
	snaG	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (83 aa)
	SPRI_0299	Hybrid PKS/NRPS (PKSI); Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2516 aa)
	SPRI_0300	Hybrid PKS/NRPS (PKSI); Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (5166 aa)
	SPRI_0936	Peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (5237 aa)
	SPRI_1899	Curamycin polyketide synthase ACP; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (85 aa)
	SPRI_3487	Beta-ketoacyl synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2377 aa)
	SPRI_3489	Polyketide synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (88 aa)
	acpP	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (82 aa)
	SPRI_5657	Non-ribosomal peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (844 aa)
	SPRI_5658	Non-ribosomal peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family. (1028 aa)

Your Current Organism:

Streptomyces pristinaespiralis

NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SPRI_0139	SPRI_0186	SPRI_0139	SPRI_0186	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.973
SPRI_0139	SPRI_0193	SPRI_0139	SPRI_0193	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	PI synthetase 3 and 4; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.877
SPRI_0139	SPRI_0194	SPRI_0139	SPRI_0194	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.847
SPRI_0139	SPRI_0299	SPRI_0139	SPRI_0299	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Hybrid PKS/NRPS (PKSI); Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.472
SPRI_0139	SPRI_0936	SPRI_0139	SPRI_0936	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.689
SPRI_0139	SPRI_3489	SPRI_0139	SPRI_3489	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.591
SPRI_0139	SPRI_5658	SPRI_0139	SPRI_5658	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	0.828
SPRI_0139	c106_07c	SPRI_0139	SPRI_0249	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.797
SPRI_0139	snaX	SPRI_0139	SPRI_0283	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Isochorismatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.558
SPRI_0155	SPRI_0186	SPRI_0155	SPRI_0186	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.945
SPRI_0155	SPRI_0193	SPRI_0155	SPRI_0193	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	PI synthetase 3 and 4; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.650
SPRI_0155	SPRI_0194	SPRI_0155	SPRI_0194	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.571
SPRI_0155	SPRI_0299	SPRI_0155	SPRI_0299	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Hybrid PKS/NRPS (PKSI); Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.469
SPRI_0155	SPRI_5657	SPRI_0155	SPRI_5657	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.471
SPRI_0155	SPRI_5658	SPRI_0155	SPRI_5658	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Non-ribosomal peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.	0.566
SPRI_0155	c106_07c	SPRI_0155	SPRI_0249	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.700
SPRI_0155	snaX	SPRI_0155	SPRI_0283	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Isochorismatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.588
SPRI_0186	SPRI_0139	SPRI_0186	SPRI_0139	PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.973
SPRI_0186	SPRI_0155	SPRI_0186	SPRI_0155	PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.945
SPRI_0186	SPRI_0193	SPRI_0186	SPRI_0193	PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	PI synthetase 3 and 4; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.	0.999