STRINGSTRING
SPRI_0801 SPRI_0801 SPRI_5852 SPRI_5852 SPRI_5658 SPRI_5658 SPRI_5368 SPRI_5368 SPRI_5055 SPRI_5055 SPRI_4962 SPRI_4962 SPRI_4340 SPRI_4340 SPRI_4339 SPRI_4339 SPRI_4275 SPRI_4275 SPRI_4244 SPRI_4244 SPRI_4213 SPRI_4213 SPRI_3886 SPRI_3886 acsA acsA SPRI_3293 SPRI_3293 SPRI_1834 SPRI_1834 SPRI_0186 SPRI_0186 SPRI_1578 SPRI_1578 SPRI_0193 SPRI_0193 SPRI_0194 SPRI_0194 SPRI_0203 SPRI_0203 SPRI_0230 SPRI_0230 SPRI_0300 SPRI_0300 SPRI_0400 SPRI_0400 SPRI_0408 SPRI_0408 SPRI_0808 SPRI_0808 SPRI_0936 SPRI_0936 SPRI_1062 SPRI_1062 SPRI_1273 SPRI_1273 SPRI_6957 SPRI_6957 SPRI_6937 SPRI_6937 SPRI_6167 SPRI_6167
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPRI_0801AMP-dependent synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (497 aa)
SPRI_5852acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (550 aa)
SPRI_5658Non-ribosomal peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family. (1028 aa)
SPRI_5368Long-chain fatty acid--CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (598 aa)
SPRI_5055acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (481 aa)
SPRI_4962AMP-dependent synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (629 aa)
SPRI_4340acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (560 aa)
SPRI_4339Long-chain fatty acid--CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (610 aa)
SPRI_4275acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (521 aa)
SPRI_4244cyclohex-1-ene-1-carboxylate:CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (498 aa)
SPRI_4213AMP-dependent synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (528 aa)
SPRI_3886Long-chain fatty acid--CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (548 aa)
acsAacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (651 aa)
SPRI_3293Long-chain fatty acid--CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (640 aa)
SPRI_1834AMP-dependent synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (538 aa)
SPRI_0186PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2561 aa)
SPRI_1578AMP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (535 aa)
SPRI_0193PI synthetase 3 and 4; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (4848 aa)
SPRI_0194Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2591 aa)
SPRI_0203Putative acyl-CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (536 aa)
SPRI_0230Putative amino acid adenyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (508 aa)
SPRI_0300Hybrid PKS/NRPS (PKSI); Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (5166 aa)
SPRI_0400fatty-acid--CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (515 aa)
SPRI_0408fatty-acid--CoA ligase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (515 aa)
SPRI_0808acetoacetyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (685 aa)
SPRI_0936Peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (5237 aa)
SPRI_1062acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (491 aa)
SPRI_1273acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (607 aa)
SPRI_6957acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (549 aa)
SPRI_6937acyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (524 aa)
SPRI_6167acetoacetyl-CoA synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (658 aa)
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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