30 items (Corynebacterium minutissimum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	echA8_3	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
	bktB	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (386 aa)
	KHO30017.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
	prpB	Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. (310 aa)
	prpD	2-methylcitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
	fadD3	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)
	fadD2	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (577 aa)
	fas-IB	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2963 aa)
	fadD1	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (553 aa)
	ppsC	NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
	boxD	enoyl-CoA hydratase; Catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (686 aa)
	fadB2	3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	pcaF	Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (398 aa)
	echA8_2	Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	adhT	NADPH:quinone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	pks13	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1607 aa)
	lipA_1	Radical SAM protein; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (357 aa)
	acnA	Aconitate hydratase; Catalyzes the conversion of citrate to isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (942 aa)
	qor	NADPH--quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
	fadD4	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
	fadE1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
	ppsE	Amino acid adenylation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1314 aa)
	fas-IA	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2970 aa)
	acpS	4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (143 aa)
	acx	acyl-CoA oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (692 aa)
	Fas-IA	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
	KHO28664.1	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	cat1_1	acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
	fadD5	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)
	acpP	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)

Your Current Organism:

Corynebacterium minutissimum

NCBI taxonomy Id: 38301
Other names: ATCC 23348, C. minutissimum, CCUG 541, CIP 100652, DSM 20651, IFO 15361, JCM 9387, NBRC 15361, NCTC 10288

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fas-IA	acx	NX84_10950	NX84_10965	Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
KHO28664.1	fas-IA	NX84_10945	NX84_11460	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.583
KHO28664.1	fas-IB	NX84_10945	NX84_02630	acyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.583
KHO30017.1	acx	NX84_04020	NX84_10965	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
KHO30017.1	bktB	NX84_04020	NX84_04035	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.510
KHO30017.1	boxD	NX84_04020	NX84_00915	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
KHO30017.1	echA8_2	NX84_04020	NX84_00860	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
KHO30017.1	echA8_3	NX84_04020	NX84_04365	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.716
KHO30017.1	fadB2	NX84_04020	NX84_00875	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-hydroxybutyryl-CoA dehydrogenase; Converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
KHO30017.1	fadD1	NX84_04020	NX84_02465	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
KHO30017.1	fadD2	NX84_04020	NX84_02640	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
KHO30017.1	fadD3	NX84_04020	NX84_02645	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
KHO30017.1	fadD4	NX84_04020	NX84_06255	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
KHO30017.1	fadD5	NX84_04020	NX84_10225	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.658
KHO30017.1	fadE1	NX84_04020	NX84_04380	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
KHO30017.1	fas-IA	NX84_04020	NX84_11460	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
KHO30017.1	fas-IB	NX84_04020	NX84_02630	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.642
KHO30017.1	pcaF	NX84_04020	NX84_00865	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.	0.510
KHO30017.1	pks13	NX84_04020	NX84_00355	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.539
acnA	echA8_2	NX84_07160	NX84_00860	Aconitate hydratase; Catalyzes the conversion of citrate to isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.	Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572