STRINGSTRING
lpdA lpdA EEY24_13455 EEY24_13455 EEY24_13460 EEY24_13460 EEY24_13465 EEY24_13465 odhB odhB sucA sucA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lpdAUnannotated protein. (476 aa)
EEY24_13455Unannotated protein. (531 aa)
EEY24_13460Unannotated protein. (325 aa)
EEY24_13465Unannotated protein. (392 aa)
odhBUnannotated protein; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (398 aa)
sucAUnannotated protein. (940 aa)
Your Current Organism:
Shewanella algae
NCBI taxonomy Id: 38313
Other names: ATCC 51192, CCUG 39064, CCUG 58400 [[Shewanella upenei]], CIP 106454, DSM 9167, IAM 14159, JCM 14758 [[Shewanella haliotis]], JCM 21037, KCTC 12896 [[Shewanella haliotis]], KCTC 22806 [[Shewanella upenei]], NBRC 103173, S. algae, Shewanella alga, Shewanella haliotis, Shewanella haliotis Kim et al. 2007, Shewanella sp. 20-23R, Shewanella sp. CNZ-1, Shewanella upenei, Shewanella upenei Kim et al. 2012, strain 20-23R [[Shewanella upenei]], strain DW01 [[Shewanella haliotis]], strain OK-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.