STRINGSTRING
GabD GabD EEY24_07960 EEY24_07960 EEY24_09395 EEY24_09395 BFS86_01950 BFS86_01950 EEY24_09445 EEY24_09445 EEY24_09450 EEY24_09450 EEY24_10445 EEY24_10445 pflB pflB ilvN ilvN EEY24_12015 EEY24_12015 EEY24_12355 EEY24_12355 EEY24_12360 EEY24_12360 EEY24_13550 EEY24_13550 fabV fabV EEY24_16210 EEY24_16210 EEY24_16215 EEY24_16215 sdhD sdhD BFS86_03050 BFS86_03050 EEY24_17115 EEY24_17115 EEY24_17310 EEY24_17310 EEY24_19130 EEY24_19130 EEY24_20580 EEY24_20580 frdB frdB EEY24_22285 EEY24_22285 EEY24_22290 EEY24_22290 EEY24_22670 EEY24_22670 EEY24_22675 EEY24_22675 fadB fadB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GabDUnannotated protein; Belongs to the aldehyde dehydrogenase family. (480 aa)
EEY24_07960Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (423 aa)
EEY24_09395Unannotated protein. (463 aa)
BFS86_01950Unannotated protein. (218 aa)
EEY24_09445Unannotated protein. (233 aa)
EEY24_09450Unannotated protein. (296 aa)
EEY24_10445Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
pflBUnannotated protein. (760 aa)
ilvNUnannotated protein. (165 aa)
EEY24_12015Unannotated protein. (573 aa)
EEY24_12355Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)
EEY24_12360Unannotated protein. (233 aa)
EEY24_13550Unannotated protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (867 aa)
fabVUnannotated protein; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (400 aa)
EEY24_16210Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (235 aa)
EEY24_16215Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa)
sdhDUnannotated protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa)
BFS86_03050Unannotated protein. (131 aa)
EEY24_17115Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (595 aa)
EEY24_17310Unannotated protein; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family. (377 aa)
EEY24_19130Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (589 aa)
EEY24_20580Unannotated protein; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (594 aa)
frdBUnannotated protein. (242 aa)
EEY24_22285Unannotated protein. (221 aa)
EEY24_22290Unannotated protein. (241 aa)
EEY24_22670Unannotated protein. (85 aa)
EEY24_22675Unannotated protein. (558 aa)
fadBUnannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (716 aa)
Your Current Organism:
Shewanella algae
NCBI taxonomy Id: 38313
Other names: ATCC 51192, CCUG 39064, CCUG 58400 [[Shewanella upenei]], CIP 106454, DSM 9167, IAM 14159, JCM 14758 [[Shewanella haliotis]], JCM 21037, KCTC 12896 [[Shewanella haliotis]], KCTC 22806 [[Shewanella upenei]], NBRC 103173, S. algae, Shewanella alga, Shewanella haliotis, Shewanella haliotis Kim et al. 2007, Shewanella sp. 20-23R, Shewanella sp. CNZ-1, Shewanella upenei, Shewanella upenei Kim et al. 2012, strain 20-23R [[Shewanella upenei]], strain DW01 [[Shewanella haliotis]], strain OK-1
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