STRINGSTRING
Rcas_4154 Rcas_4154 Rcas_4155 Rcas_4155 Rcas_4156 Rcas_4156 Rcas_4157 Rcas_4157 Rcas_4159 Rcas_4159
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rcas_4154PFAM: response regulator receiver; KEGG: rrs:RoseRS_3353 response regulator receiver protein. (419 aa)
Rcas_4155PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_3352 type II secretion system protein E. (471 aa)
Rcas_4156PFAM: type II secretion system protein; KEGG: rrs:RoseRS_3351 type II secretion system protein. (323 aa)
Rcas_4157PFAM: type II secretion system protein; KEGG: rrs:RoseRS_3350 type II secretion system protein. (309 aa)
Rcas_4159PFAM: TadE family protein; KEGG: rrs:RoseRS_3348 TadE family protein. (465 aa)
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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