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| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (429 aa) |
| | Rcas_0090 | PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_4542 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (697 aa) |
| | Rcas_0131 | PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_4338 metallophosphoesterase. (327 aa) |
| | Rcas_0224 | KEGG: rrs:RoseRS_0607 hypothetical protein. (163 aa) |
| | Rcas_0253 | 4Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (78 aa) |
| | mdh | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (309 aa) |
| | Rcas_0393 | PFAM: alpha amylase catalytic region; KEGG: rrs:RoseRS_0138 alpha amylase, catalytic region. (735 aa) |
| | Rcas_0416 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (678 aa) |
| | tal | Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (217 aa) |
| | Rcas_0505 | PFAM: Di-haem cytochrome c peroxidase; KEGG: rrs:RoseRS_3631 cytochrome-c peroxidase. (365 aa) |
| | Rcas_0566 | NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_3854 NADH dehydrogenase (quinone). (526 aa) |
| | Rcas_0581 | KEGG: rrs:RoseRS_3488 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family. (428 aa) |
| | Rcas_0594 | PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_4162 pyruvate carboxyltransferase. (313 aa) |
| | Rcas_0643 | KEGG: rrs:RoseRS_0566 multimeric flavodoxin WrbA-like protein. (172 aa) |
| | Rcas_0653 | PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0537 metallophosphoesterase. (283 aa) |
| | gpmI | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (524 aa) |
| | pgi | PFAM: phosphoglucose isomerase (PGI); KEGG: rrs:RoseRS_4356 glucose-6-phosphate isomerase; Belongs to the GPI family. (543 aa) |
| | Rcas_0715 | PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: rrs:RoseRS_4359 aldehyde ferredoxin oxidoreductase. (596 aa) |
| | Rcas_0881 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (918 aa) |
| | Rcas_0925 | PFAM: fumarate lyase; KEGG: rrs:RoseRS_3341 fumarate lyase. (484 aa) |
| | Rcas_0933 | PFAM: metalloenzyme domain protein; KEGG: rrs:RoseRS_4288 metalloenzyme domain protein. (312 aa) |
| | Rcas_0935 | TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rrs:RoseRS_4286 6-phosphogluconate dehydrogenase, decarboxylating. (299 aa) |
| | glgC | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (416 aa) |
| | Rcas_0947 | PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_3698 nucleotidyl transferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (415 aa) |
| | tpiA | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (254 aa) |
| | Rcas_1188 | KEGG: rrs:RoseRS_4471 hypothetical protein. (351 aa) |
| | Rcas_1241 | TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rrs:RoseRS_0785 isocitrate dehydrogenase, NADP-dependent. (454 aa) |
| | Rcas_1247 | PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_0827 glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family. (703 aa) |
| | Rcas_1320 | TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rrs:RoseRS_3674 NADH-quinone oxidoreductase, E subunit. (174 aa) |
| | nuoD1 | NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (417 aa) |
| | nuoC | NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (174 aa) |
| | nuoB1 | NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (167 aa) |
| | nuoA | NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (118 aa) |
| | Rcas_1364 | PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rrs:RoseRS_3543 NADH dehydrogenase (ubiquinone), 24 kDa subunit. (173 aa) |
| | Rcas_1365 | PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: rrs:RoseRS_3542 NADH dehydrogenase (quinone). (532 aa) |
| | Rcas_1366 | PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_3541 ferredoxin. (235 aa) |
| | Rcas_1368 | PFAM: nickel-dependent hydrogenase large subunit; KEGG: rrs:RoseRS_3539 nickel-dependent hydrogenase, large subunit. (475 aa) |
| | Rcas_1462 | KEGG: rrs:RoseRS_4139 hypothetical protein. (226 aa) |
| | Rcas_1463 | KEGG: rrs:RoseRS_4140 Fe-S-cluster-containing hydrogenase components 1-like protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1010 aa) |
| | Rcas_1464 | PFAM: Polysulphide reductase NrfD; KEGG: rrs:RoseRS_4141 polysulphide reductase, NrfD. (471 aa) |
| | Rcas_1465 | KEGG: rrs:RoseRS_4142 hypothetical protein. (192 aa) |
| | Rcas_1466 | KEGG: rrs:RoseRS_4143 hypothetical protein. (193 aa) |
| | Rcas_1531 | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (399 aa) |
| | Rcas_1532 | KEGG: rrs:RoseRS_3396 2-oxoglutarate dehydrogenase, E1 subunit; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region. (953 aa) |
| | Rcas_1574 | Cytochrome c oxidase subunit II; PFAM: blue (type 1) copper domain protein; cytochrome c oxidase subunit II; KEGG: rrs:RoseRS_0933 cytochrome c oxidase, subunit II. (168 aa) |
| | Rcas_1575 | PFAM: cytochrome c oxidase subunit I; KEGG: rrs:RoseRS_0934 cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family. (561 aa) |
| | Rcas_1640 | KEGG: rrs:RoseRS_1313 hypothetical protein. (313 aa) |
| | Rcas_1692 | KEGG: rrs:RoseRS_1428 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family. (479 aa) |
| | Rcas_1753 | PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_2116 regulatory protein, MerR. (319 aa) |
| | Rcas_1771 | NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_2099 NADH dehydrogenase (quinone). (500 aa) |
| | Rcas_1776 | PFAM: Acetone carboxylase gamma subunit; KEGG: rrs:RoseRS_2093 acetone carboxylase gamma subunit-like protein. (173 aa) |
| | zwf | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (518 aa) |
| | Rcas_1863 | PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: tth:TTC1834 tungsten-containing aldehyde ferredoxin oxidoreductase. (609 aa) |
| | Rcas_1875 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (744 aa) |
| | Rcas_1946 | Transketolase central region; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (795 aa) |
| | Rcas_2011 | Dihydrolipoyllysine-residue succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_1726 dihydrolipoyllysine-residue succinyltransferase. (454 aa) |
| | Rcas_2051 | PFAM: Disulphide bond formation protein DsbB; KEGG: rrs:RoseRS_1773 disulphide bond formation protein DsbB; Belongs to the DsbB family. (200 aa) |
| | pgk | PFAM: phosphoglycerate kinase; KEGG: rrs:RoseRS_1473 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (395 aa) |
| | nuoA-2 | NADH-ubiquinone/plastoquinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (118 aa) |
| | nuoB2 | NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (268 aa) |
| | Rcas_2090 | PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rrs:RoseRS_2991 NADH (or F420H2) dehydrogenase, subunit C. (189 aa) |
| | nuoD2 | NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (374 aa) |
| | Rcas_2092 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2993 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (449 aa) |
| | nuoH | NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (452 aa) |
| | Rcas_2094 | NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (217 aa) |
| | nuoK | NADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (108 aa) |
| | Rcas_2096 | KEGG: rrs:RoseRS_2997 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I). (726 aa) |
| | Rcas_2097 | KEGG: rrs:RoseRS_2998 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (566 aa) |
| | Rcas_2098 | KEGG: rrs:RoseRS_2999 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (505 aa) |
| | nuoN1 | Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (540 aa) |
| | Rcas_2172 | Cyclic nucleotide-binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Polysulphide reductase NrfD; KEGG: rrs:RoseRS_1792 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (565 aa) |
| | Rcas_2173 | PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_1793 formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1016 aa) |
| | Rcas_2249 | KEGG: rrs:RoseRS_3087 ferredoxin-like protein. (112 aa) |
| | Rcas_2252 | KEGG: rrs:RoseRS_3090 hypothetical protein. (191 aa) |
| | Rcas_2297 | PFAM: protein of unknown function DUF849; KEGG: rrs:RoseRS_1538 protein of unknown function DUF849. (310 aa) |
| | Rcas_2308 | PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rrs:RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. (615 aa) |
| | Rcas_2309 | PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rrs:RoseRS_1552 thiamine pyrophosphate enzyme domain protein TPP-binding. (348 aa) |
| | Rcas_2363 | PFAM: cytochrome c class I; KEGG: rrs:RoseRS_2484 cytochrome c, class I. (138 aa) |
| | ppc | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (938 aa) |
| | Rcas_2492 | KEGG: rrs:RoseRS_4171 flavodoxin-like protein. (215 aa) |
| | Rcas_2504 | KEGG: rrs:RoseRS_1839 hypothetical protein. (255 aa) |
| | Rcas_2513 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. (385 aa) |
| | pfkA | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. (372 aa) |
| | Rcas_2584 | KEGG: rrs:RoseRS_2803 chromosome segregation ATPase-like protein. (928 aa) |
| | Rcas_2588 | Hypothetical protein. (172 aa) |
| | Rcas_2631 | PFAM: cytochrome c class I; KEGG: rrs:RoseRS_1498 cytochrome c, class I. (147 aa) |
| | msrQ | Ferric reductase domain protein transmembrane component domain; Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, usin [...] (236 aa) |
| | Rcas_2736 | PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rrs:RoseRS_2668 NADH ubiquinone oxidoreductase, 20 kDa subunit. (125 aa) |
| | Rcas_2737 | PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_2669 NADH/ubiquinone/plastoquinone (complex I). (484 aa) |
| | Rcas_2739 | KEGG: rrs:RoseRS_2671 hypothetical protein. (574 aa) |
| | Rcas_2740 | PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: rrs:RoseRS_2672 NADH-ubiquinone oxidoreductase, chain 49kDa. (358 aa) |
| | Rcas_2780 | PFAM: cytochrome c class I; KEGG: sil:SPOA0361 cytochrome c family protein. (164 aa) |
| | glgA | Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (509 aa) |
| | Rcas_2804 | PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_1675 catalytic domain of components of various dehydrogenase complexes. (445 aa) |
| | Rcas_2894 | PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_3166 cyclic nucleotide-binding protein. (482 aa) |
| | Rcas_2950 | KEGG: rrs:RoseRS_3141 hypothetical protein. (994 aa) |
| | Rcas_2967 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (910 aa) |
| | rpiA | Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (234 aa) |
| | Rcas_2981 | KEGG: rrs:RoseRS_2911 hypothetical protein. (124 aa) |
| | Rcas_2983 | PFAM: ferredoxin; KEGG: rrs:RoseRS_2914 ferredoxin. (124 aa) |
| | Rcas_3035 | PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2061 hypothetical protein. (215 aa) |
| | Rcas_3081 | TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2398 succinate dehydrogenase and fumarate reductase iron-sulfur protein. (249 aa) |
| | Rcas_3112 | PFAM: blue (type 1) copper domain protein; KEGG: rrs:RoseRS_2366 blue (type 1) copper domain protein. (159 aa) |
| | Rcas_3146 | TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: rrs:RoseRS_2321 Ni/Fe-hydrogenase, b-type cytochrome subunit. (258 aa) |
| | Rcas_3147 | PFAM: nickel-dependent hydrogenase large subunit; KEGG: rrs:RoseRS_2320 nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (570 aa) |
| | Rcas_3148 | KEGG: rrs:RoseRS_2319 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein. (417 aa) |
| | Rcas_3166 | PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_2299 electron transfer flavoprotein beta-subunit. (258 aa) |
| | Rcas_3167 | PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_2298 electron transfer flavoprotein, alpha subunit. (328 aa) |
| | sucC | succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (379 aa) |
| | nuoN2 | Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (498 aa) |
| | Rcas_3383 | KEGG: rrs:RoseRS_2231 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I). (507 aa) |
| | Rcas_3384 | KEGG: rrs:RoseRS_2232 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I). (654 aa) |
| | nuoK-2 | NADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (100 aa) |
| | Rcas_3386 | NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (170 aa) |
| | nuoI | NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (165 aa) |
| | nuoH-2 | NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (390 aa) |
| | Rcas_3391 | NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (451 aa) |
| | Rcas_3425 | PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mem:Memar_0224 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (82 aa) |
| | Rcas_3430 | Hydroxylamine reductase; PFAM: cytochrome d1 heme region; KEGG: hch:HCH_04416 cytochrome c, mono- and diheme variants. (690 aa) |
| | Rcas_3494 | PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_0049 pyruvate carboxyltransferase. (317 aa) |
| | Rcas_3515 | PFAM: pyruvate carboxyltransferase; KEGG: sru:SRU_1246 3-hydroxy-3-methylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (297 aa) |
| | Rcas_3556 | PFAM: cytochrome c oxidase subunit III; KEGG: rrs:RoseRS_2265 cytochrome c oxidase, subunit III. (203 aa) |
| | Rcas_3557 | Cytochrome c oxidase subunit I type; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (641 aa) |
| | Rcas_3558 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (370 aa) |
| | Rcas_3575 | PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rrs:RoseRS_1368 pyruvate ferredoxin/flavodoxin oxidoreductase. (183 aa) |
| | Rcas_3576 | PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rrs:RoseRS_1369 thiamine pyrophosphate enzyme domain protein TPP-binding. (249 aa) |
| | Rcas_3596 | PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_0956 electron transfer flavoprotein beta-subunit. (278 aa) |
| | Rcas_3597 | PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_0957 electron transfer flavoprotein, alpha subunit. (342 aa) |
| | sucD | succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa) |
| | Rcas_3753 | KEGG: rrs:RoseRS_3267 hypothetical protein. (320 aa) |
| | Rcas_3754 | TIGRFAM: photosynthetic reaction center, M subunit; photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: rrs:RoseRS_3268 photosynthetic reaction center, M subunit. (641 aa) |
| | Rcas_3756 | Antenna complex alpha/beta subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (55 aa) |
| | Rcas_3757 | Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; KEGG: rrs:RoseRS_3271 putative transcriptional regulator, MerR family. (333 aa) |
| | Rcas_3792 | KEGG: sth:STH567 hypothetical protein. (382 aa) |
| | Rcas_3805 | PFAM: nickel-dependent hydrogenase large subunit; KEGG: fra:Francci3_1076 hydrogen:quinone oxidoreductase. (540 aa) |
| | Rcas_3806 | PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: fra:Francci3_1077 hydrogenase (NiFe) small subunit (HydA). (323 aa) |
| | Rcas_3822 | KEGG: rrs:RoseRS_1893 hypothetical protein. (158 aa) |
| | Rcas_3898 | KEGG: rrs:RoseRS_0596 hypothetical protein. (467 aa) |
| | Rcas_3899 | KEGG: rrs:RoseRS_0597 hypothetical protein. (399 aa) |
| | Rcas_4376 | KEGG: rrs:RoseRS_4165 malate synthase A; TIGRFAM: malate synthase A; PFAM: malate synthase. (523 aa) |
| | Rcas_4423 | PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: rrs:RoseRS_0455 protein of unknown function DUF418. (417 aa) |
