STRINGSTRING
Rcas_0068 Rcas_0068 Rcas_0141 Rcas_0141 Rcas_0142 Rcas_0142 Rcas_0157 Rcas_0157 Rcas_0250 Rcas_0250 rsmA rsmA Rcas_0327 Rcas_0327 Rcas_0397 Rcas_0397 Rcas_0407 Rcas_0407 Rcas_0454 Rcas_0454 Rcas_0552 Rcas_0552 Rcas_0556 Rcas_0556 Rcas_0623 Rcas_0623 Rcas_0636 Rcas_0636 Rcas_0637 Rcas_0637 Rcas_0638 Rcas_0638 Rcas_0639 Rcas_0639 Rcas_0640 Rcas_0640 cbiD cbiD Rcas_0720 Rcas_0720 Rcas_0789 Rcas_0789 Rcas_0808 Rcas_0808 Rcas_0817 Rcas_0817 Rcas_0832 Rcas_0832 Rcas_0854 Rcas_0854 Rcas_0875 Rcas_0875 Rcas_0884 Rcas_0884 Rcas_0941 Rcas_0941 Rcas_0958 Rcas_0958 pcm pcm Rcas_1028 Rcas_1028 Rcas_1074 Rcas_1074 Rcas_1080 Rcas_1080 rsmH rsmH Rcas_1130 Rcas_1130 Rcas_1138 Rcas_1138 Rcas_1171 Rcas_1171 Rcas_1178 Rcas_1178 Rcas_1262 Rcas_1262 Rcas_1293 Rcas_1293 menG menG Rcas_1298 Rcas_1298 Rcas_1315 Rcas_1315 Rcas_1325 Rcas_1325 trmD trmD prmC prmC Rcas_1389 Rcas_1389 Rcas_1425 Rcas_1425 Rcas_1437 Rcas_1437 Rcas_1535 Rcas_1535 Rcas_1568 Rcas_1568 Rcas_1584 Rcas_1584 Rcas_1608 Rcas_1608 Rcas_1707 Rcas_1707 Rcas_1732 Rcas_1732 Rcas_1755 Rcas_1755 Rcas_1798 Rcas_1798 Rcas_1808 Rcas_1808 Rcas_1810 Rcas_1810 Rcas_1933 Rcas_1933 Rcas_1939 Rcas_1939 Rcas_1988 Rcas_1988 Rcas_2010 Rcas_2010 Rcas_2035 Rcas_2035 Rcas_2047 Rcas_2047 Rcas_2134 Rcas_2134 Rcas_2136 Rcas_2136 prmA prmA Rcas_2228 Rcas_2228 Rcas_2229 Rcas_2229 Rcas_2231 Rcas_2231 Rcas_2236 Rcas_2236 Rcas_2312 Rcas_2312 Rcas_2343 Rcas_2343 Rcas_2398 Rcas_2398 Rcas_2450 Rcas_2450 Rcas_2507 Rcas_2507 Rcas_2518 Rcas_2518 Rcas_2562 Rcas_2562 Rcas_2582 Rcas_2582 Rcas_2758 Rcas_2758 Rcas_2798 Rcas_2798 Rcas_2993 Rcas_2993 rsmI rsmI Rcas_3037 Rcas_3037 Rcas_3055 Rcas_3055 Rcas_3056 Rcas_3056 Rcas_3082 Rcas_3082 Rcas_3142 Rcas_3142 Rcas_3189 Rcas_3189 Rcas_3201 Rcas_3201 Rcas_3259 Rcas_3259 Rcas_3264 Rcas_3264 Rcas_3324 Rcas_3324 Rcas_3339 Rcas_3339 rsmG rsmG Rcas_3416 Rcas_3416 Rcas_3528 Rcas_3528 Rcas_3579 Rcas_3579 rlmN rlmN Rcas_3593 Rcas_3593 Rcas_3603 Rcas_3603 Rcas_3605 Rcas_3605 Rcas_3693 Rcas_3693 Rcas_3878 Rcas_3878 Rcas_3884 Rcas_3884 Rcas_3941 Rcas_3941 Rcas_4038 Rcas_4038 Rcas_4065 Rcas_4065 Rcas_4073 Rcas_4073 Rcas_4090 Rcas_4090 Rcas_4101 Rcas_4101 mtaD mtaD Rcas_4183 Rcas_4183 Rcas_4209 Rcas_4209 Rcas_4293 Rcas_4293 Rcas_4329 Rcas_4329 Rcas_4394 Rcas_4394 Rcas_4397 Rcas_4397 Rcas_4398 Rcas_4398 Rcas_4431 Rcas_4431
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rcas_0068KEGG: rrs:RoseRS_4009 hypothetical protein. (464 aa)
Rcas_0141PFAM: Methyltransferase type 11; KEGG: mgm:Mmc1_0584 methyltransferase type 11. (227 aa)
Rcas_0142PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gur:Gura_3058 methyltransferase type 12. (309 aa)
Rcas_0157KEGG: rrs:RoseRS_0486 hypothetical protein. (346 aa)
Rcas_0250KEGG: rrs:RoseRS_0294 hypothetical protein. (321 aa)
rsmADimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (302 aa)
Rcas_0327PFAM: Gp37Gp68 family protein; KEGG: cph:Cpha266_1493 phage Gp37Gp68 family protein. (237 aa)
Rcas_0397PFAM: DNA methylase N-4/N-6 domain protein; KEGG: aeh:Mlg_1539 DNA methylase N-4/N-6 domain protein. (1028 aa)
Rcas_0407KEGG: ana:all3632 site-specific DNA-methyltransferase (cytosine-specific). (476 aa)
Rcas_0454PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_4225 radical SAM domain protein. (576 aa)
Rcas_0552TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; methyltransferase small; (Uracil-5)-methyltransferase; KEGG: rrs:RoseRS_0352 RNA methyltransferase, TrmA family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (439 aa)
Rcas_0556TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: rrs:RoseRS_3862 hemolysin A. (272 aa)
Rcas_0623Methyltransferase type 11; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3510 methyltransferase type 11. (278 aa)
Rcas_0636TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_0573 uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. (271 aa)
Rcas_0637TIGRFAM: precorrin-3B C17-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: rrs:RoseRS_0572 precorrin-3B C17-methyltransferase. (837 aa)
Rcas_0638KEGG: rrs:RoseRS_0571 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Belongs to the precorrin methyltransferase family. (271 aa)
Rcas_0639TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_0570 precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family. (242 aa)
Rcas_0640KEGG: rrs:RoseRS_0569 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase. (408 aa)
cbiDCobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (413 aa)
Rcas_0720PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4381 methyltransferase type 11. (225 aa)
Rcas_0789PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4435 methyltransferase type 11. (264 aa)
Rcas_0808PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mta:Moth_1443 UbiE/COQ5 methyltransferase. (182 aa)
Rcas_0817PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_4465 methyltransferase type 11. (282 aa)
Rcas_0832KEGG: rrs:RoseRS_4481 hypothetical protein. (400 aa)
Rcas_0854PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: chu:CHU_1562 SAM-dependent methyltransferase. (266 aa)
Rcas_0875PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_4513 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family. (281 aa)
Rcas_0884KEGG: rrs:RoseRS_0233 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase. (294 aa)
Rcas_0941PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4278 methyltransferase type 11. (287 aa)
Rcas_0958KEGG: rrs:RoseRS_3691 hypothetical protein. (408 aa)
pcmprotein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (218 aa)
Rcas_1028Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0400 methyltransferase type 11. (250 aa)
Rcas_1074KEGG: xft:PD1607 modification methylase NspV. (550 aa)
Rcas_1080PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0124 site-specific DNA-methyltransferase (adenine-specific). (305 aa)
rsmHS-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (312 aa)
Rcas_1130PFAM: methyltransferase small; KEGG: rrs:RoseRS_3753 methyltransferase small. (198 aa)
Rcas_1138PFAM: Ribosomal small subunit Rsm22; KEGG: rrs:RoseRS_3744 rRNA methylase-like protein. (354 aa)
Rcas_1171PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_4284 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family. (314 aa)
Rcas_1178PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0807 methyltransferase type 11. (186 aa)
Rcas_1262PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_0509 methyltransferase type 11. (232 aa)
Rcas_1293PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_2183 DNA methylase N-4/N-6 domain protein. (356 aa)
menGUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (238 aa)
Rcas_1298PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2188 methyltransferase type 11. (269 aa)
Rcas_1315Hypothetical protein; KEGG: sbl:Sbal_1580 DNA methylase N-4/N-6 domain protein. (273 aa)
Rcas_1325TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rrs:RoseRS_3679 methylated-DNA--protein-cysteine methyltransferase. (175 aa)
trmDtRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. (298 aa)
prmCModification methylase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (289 aa)
Rcas_1389TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: rrs:RoseRS_4109 DNA-cytosine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (387 aa)
Rcas_1425Site-specific DNA-methyltransferase (adenine-specific); PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cje:Cj0208 DNA modification methylase (adenine-specific methyltransferase). (389 aa)
Rcas_1437PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rrs:RoseRS_1035 tRNA/rRNA methyltransferase (SpoU); Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (235 aa)
Rcas_1535Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1911 methyltransferase type 11. (265 aa)
Rcas_1568Thymidylate synthase complementing protein ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (568 aa)
Rcas_1584KEGG: rrs:RoseRS_0942 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB. (527 aa)
Rcas_1608PFAM: protein of unknown function DUF559; protein of unknown function DUF1156; KEGG: rrs:RoseRS_0239 protein of unknown function DUF1156. (1279 aa)
Rcas_1707PFAM: peptidase A24A prepilin type IV; KEGG: pca:Pcar_2139 type 4 prepilin-like proteins leader peptide processing enzyme. (149 aa)
Rcas_1732PFAM: protein of unknown function DUF1385; KEGG: rrs:RoseRS_2139 protein of unknown function DUF1385. (313 aa)
Rcas_1755Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; protein of unknown function DUF343; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2114 methyltransferase type 11. (276 aa)
Rcas_1798PFAM: O-methyltransferase family 3; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2619 O-methyltransferase, family 3. (217 aa)
Rcas_1808TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_2609 putative methyltransferase. (191 aa)
Rcas_1810PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tel:tlr1878 DNA-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. (329 aa)
Rcas_1933PFAM: O-methyltransferase family 3; KEGG: rrs:RoseRS_2965 O-methyltransferase, family 3. (245 aa)
Rcas_1939PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0953 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family. (375 aa)
Rcas_1988PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1720 glycosyl transferase, group 1. (374 aa)
Rcas_2010PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0375 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family. (370 aa)
Rcas_2035PFAM: protein of unknown function DUF574; KEGG: rrs:RoseRS_1762 protein of unknown function DUF574. (278 aa)
Rcas_2047SMART: ribosomal RNA adenine methylase transferase; KEGG: rrs:RoseRS_1769 hypothetical protein. (185 aa)
Rcas_2134PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rrs:RoseRS_3043 D12 class N6 adenine-specific DNA methyltransferase. (289 aa)
Rcas_2136Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (257 aa)
prmARibosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. (337 aa)
Rcas_2228Site-specific DNA-methyltransferase (adenine-specific); PFAM: Eco57I restriction endonuclease; KEGG: ajs:Ajs_0197 Eco57I restriction endonuclease. (526 aa)
Rcas_2229KEGG: cte:CT1159 type III restriction system methylase. (221 aa)
Rcas_2231PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sil:SPO3451 modification methylase; Belongs to the N(4)/N(6)-methyltransferase family. (369 aa)
Rcas_2236KEGG: hhe:HH0238 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase. (314 aa)
Rcas_2312Methyltransferase type 11; PFAM: putative RNA methylase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1224 methyltransferase type 11. (276 aa)
Rcas_2343PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2472 methyltransferase type 11. (367 aa)
Rcas_2398PFAM: protein of unknown function UPF0261; KEGG: rrs:RoseRS_2773 protein of unknown function UPF0261. (411 aa)
Rcas_2450PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: deh:cbdb_A1620 radical SAM/B12 binding domain protein. (590 aa)
Rcas_2507PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1837 methyltransferase type 12. (272 aa)
Rcas_2518PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_1826 DNA methylase N-4/N-6 domain protein. (464 aa)
Rcas_2562Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2782 methyltransferase type 11. (227 aa)
Rcas_2582PFAM: putative RNA methylase; Methyltransferase type 11; KEGG: rrs:RoseRS_2801 putative RNA methylase. (362 aa)
Rcas_2758PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; KEGG: rrs:RoseRS_2516 methionine synthase, vitamin-B12 independent. (340 aa)
Rcas_2798PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1091 methyltransferase type 11. (272 aa)
Rcas_2993PFAM: putative RNA methylase; Methyltransferase type 11; KEGG: rrs:RoseRS_2276 putative RNA methylase. (350 aa)
rsmIUroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (232 aa)
Rcas_3037KEGG: rrs:RoseRS_2063 hypothetical protein. (330 aa)
Rcas_3055PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2423 methyltransferase type 11. (258 aa)
Rcas_3056PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2422 methyltransferase type 11. (223 aa)
Rcas_3082KEGG: rrs:RoseRS_2397 hypothetical protein. (816 aa)
Rcas_3142PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rrs:RoseRS_2337 tRNA/rRNA methyltransferase (SpoU). (496 aa)
Rcas_3189PFAM: MCP methyltransferase CheR-type; Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mll3672 methyl transferase-like protein. (297 aa)
Rcas_3201PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rrs:RoseRS_0999 methyl-accepting chemotaxis sensory transducer. (608 aa)
Rcas_3259PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase. (297 aa)
Rcas_3264PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1986 methyltransferase type 11. (237 aa)
Rcas_3324PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3984 methyltransferase type 11. (244 aa)
Rcas_3339(Uracil-5)-methyltransferase; PFAM: conserved hypothetical protein; (Uracil-5)-methyltransferase; KEGG: rrs:RoseRS_3894 (uracil-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (405 aa)
rsmGMethyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (234 aa)
Rcas_3416PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: rrs:RoseRS_1565 peptidase A24A domain protein. (254 aa)
Rcas_3528PFAM: protein of unknown function DUF512; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2144 protein of unknown function DUF512. (515 aa)
Rcas_3579PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_1372 radical SAM domain protein. (409 aa)
rlmNRadical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (399 aa)
Rcas_3593PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0953 DNA methylase N-4/N-6 domain protein; Belongs to the N(4)/N(6)-methyltransferase family. (372 aa)
Rcas_3603KEGG: cme:CMF181C small GTP-binding protein of Rab family; TIGRFAM: small GTP-binding protein; PFAM: Miro domain protein; Ras family protein; SMART: Ras small GTPase, Ras type; Ras small GTPase, Rho type; Ras small GTPase, Rab type. (174 aa)
Rcas_3605PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0962 methyltransferase type 12. (262 aa)
Rcas_3693PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ecs:ECs4134 putative methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. (332 aa)
Rcas_3878Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1208 aa)
Rcas_3884PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0855 glycosyl transferase, group 1. (359 aa)
Rcas_3941PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1103 methyltransferase type 11. (237 aa)
Rcas_4038PFAM: putative RNA methylase; KEGG: rrs:RoseRS_2251 hypothetical protein; Belongs to the N(4)/N(6)-methyltransferase family. (483 aa)
Rcas_4065PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0603 methyltransferase type 11. (295 aa)
Rcas_4073KEGG: ade:Adeh_2376 SAM-dependent methyltransferase. (402 aa)
Rcas_4090SMART: PUA domain containing protein; KEGG: rrs:RoseRS_0887 PUA domain containing protein. (396 aa)
Rcas_4101KEGG: rba:RB3053 hypothetical protein. (504 aa)
mtaDAmidohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. (663 aa)
Rcas_4183PFAM: DNA methylase N-4/N-6 domain protein; KEGG: xfa:XF0641 DNA methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family. (370 aa)
Rcas_4209MCP methyltransferase, CheR-type with Tpr repeats; KEGG: rrs:RoseRS_0033 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein. (502 aa)
Rcas_4293KEGG: rrs:RoseRS_1243 hypothetical protein. (539 aa)
Rcas_4329KEGG: rrs:RoseRS_0213 hypothetical protein. (388 aa)
Rcas_4394TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rrs:RoseRS_3458 RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (248 aa)
Rcas_4397KEGG: rrs:RoseRS_2284 hypothetical protein. (475 aa)
Rcas_4398Endonuclease; KEGG: xoo:XOO0608 endonuclease. (264 aa)
Rcas_4431Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0749 methyltransferase type 11. (295 aa)
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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