STRINGSTRING
Rcas_4329 Rcas_4329 rplT rplT Rcas_1439 Rcas_1439 Rcas_1452 Rcas_1452 Rcas_1459 Rcas_1459 Rcas_1461 Rcas_1461 purF purF Rcas_1523 Rcas_1523 bchL bchL Rcas_1542 Rcas_1542 Rcas_1544 Rcas_1544 Rcas_1551 Rcas_1551 pheA pheA leuA leuA Rcas_1570 Rcas_1570 Rcas_1586 Rcas_1586 Rcas_1618 Rcas_1618 ychF ychF rpsP rpsP Rcas_1730 Rcas_1730 Rcas_1751 Rcas_1751 Rcas_1766 Rcas_1766 Rcas_1777 Rcas_1777 Rcas_1778 Rcas_1778 Rcas_1784 Rcas_1784 Rcas_1864 Rcas_1864 Rcas_1888 Rcas_1888 Rcas_1889 Rcas_1889 Rcas_1890 Rcas_1890 Rcas_1963 Rcas_1963 Rcas_1968 Rcas_1968 Rcas_2012 Rcas_2012 pdhA pdhA Rcas_2022 Rcas_2022 Rcas_2024 Rcas_2024 hemA hemA hemH-2 hemH-2 Rcas_2040 Rcas_2040 Rcas_2055 Rcas_2055 Rcas_2072 Rcas_2072 Rcas_2073 Rcas_2073 Rcas_2074 Rcas_2074 Rcas_2075 Rcas_2075 nuoH nuoH nuoN1 nuoN1 Rcas_2108 Rcas_2108 fni fni Rcas_2259 Rcas_2259 Rcas_2282 Rcas_2282 Rcas_2311 Rcas_2311 Rcas_2358 Rcas_2358 Rcas_2410 Rcas_2410 Rcas_2461 Rcas_2461 Rcas_2474 Rcas_2474 Rcas_2509 Rcas_2509 Rcas_2520 Rcas_2520 Rcas_2550 Rcas_2550 Rcas_2554 Rcas_2554 Rcas_2584 Rcas_2584 Rcas_2677 Rcas_2677 Rcas_2685 Rcas_2685 Rcas_2760 Rcas_2760 nth nth Rcas_2767 Rcas_2767 Rcas_2851 Rcas_2851 Rcas_2852 Rcas_2852 Rcas_2854 Rcas_2854 Rcas_2878 Rcas_2878 Rcas_2912 Rcas_2912 Rcas_2918 Rcas_2918 Rcas_2934 Rcas_2934 Rcas_2938 Rcas_2938 Rcas_2962 Rcas_2962 Rcas_2984 Rcas_2984 Rcas_3018 Rcas_3018 Rcas_3019 Rcas_3019 Rcas_3029 Rcas_3029 Rcas_3051 Rcas_3051 Rcas_3062 Rcas_3062 Rcas_3063 Rcas_3063 Rcas_3122 Rcas_3122 Rcas_3165 Rcas_3165 Rcas_3167 Rcas_3167 Rcas_3169 Rcas_3169 purD purD Rcas_3224 Rcas_3224 Rcas_3230 Rcas_3230 Rcas_4426 Rcas_4426 Rcas_4339 Rcas_4339 Rcas_4326 Rcas_4326 rplK rplK cysC cysC ybeY ybeY Rcas_4262 Rcas_4262 Rcas_4254 Rcas_4254 Rcas_4252 Rcas_4252 Rcas_4224 Rcas_4224 Rcas_4220 Rcas_4220 Rcas_4216 Rcas_4216 Rcas_4210 Rcas_4210 mtaD mtaD Rcas_4173 Rcas_4173 Rcas_4143 Rcas_4143 Rcas_4092 Rcas_4092 Rcas_4086 Rcas_4086 nifH nifH rpsS rpsS rplF rplF adk-2 adk-2 rpmJ rpmJ rpsM rpsM truA truA Rcas_3973 Rcas_3973 Rcas_3935 Rcas_3935 Rcas_3934 Rcas_3934 Rcas_3909 Rcas_3909 Rcas_3885 Rcas_3885 Rcas_3829 Rcas_3829 Rcas_3818 Rcas_3818 Rcas_3811 Rcas_3811 Rcas_3792 Rcas_3792 Rcas_3773 Rcas_3773 Rcas_3751 Rcas_3751 pdxS pdxS Rcas_3713 Rcas_3713 Rcas_3619 Rcas_3619 Rcas_3617 Rcas_3617 Rcas_3615 Rcas_3615 Rcas_3613 Rcas_3613 Rcas_3608 Rcas_3608 Rcas_3599 Rcas_3599 Rcas_3598 Rcas_3598 Rcas_3597 Rcas_3597 hppA hppA Rcas_3553 Rcas_3553 Rcas_3544 Rcas_3544 Rcas_3532 Rcas_3532 Rcas_3518 Rcas_3518 Rcas_3515 Rcas_3515 Rcas_3495 Rcas_3495 Rcas_3494 Rcas_3494 Rcas_3493 Rcas_3493 Rcas_3492 Rcas_3492 Rcas_3485 Rcas_3485 lysY lysY Rcas_3467 Rcas_3467 lysZ lysZ Rcas_3449 Rcas_3449 Rcas_3448 Rcas_3448 Rcas_3445 Rcas_3445 Rcas_3443 Rcas_3443 Rcas_3441 Rcas_3441 Rcas_3401 Rcas_3401 adk adk nuoH-2 nuoH-2 nuoN2 nuoN2 nadD nadD Rcas_3364 Rcas_3364 serC serC argC argC argB argB Rcas_3360 Rcas_3360 argJ argJ Rcas_3335 Rcas_3335 tsaD tsaD Rcas_0981 Rcas_0981 Rcas_0962 Rcas_0962 Rcas_0926 Rcas_0926 Rcas_0911 Rcas_0911 Rcas_0910 Rcas_0910 Rcas_0909 Rcas_0909 Rcas_0864 Rcas_0864 Rcas_0848 Rcas_0848 Rcas_0828 Rcas_0828 Rcas_0816 Rcas_0816 Rcas_0807 Rcas_0807 Rcas_0695 Rcas_0695 Rcas_0654 Rcas_0654 Rcas_0648 Rcas_0648 Rcas_0644 Rcas_0644 Rcas_0594 Rcas_0594 Rcas_0583 Rcas_0583 Rcas_0558 Rcas_0558 Rcas_0551 Rcas_0551 nfo nfo Rcas_0545 Rcas_0545 fhs fhs Rcas_0511 Rcas_0511 Rcas_0439 Rcas_0439 Rcas_0437 Rcas_0437 Rcas_0434 Rcas_0434 Rcas_0386 Rcas_0386 Rcas_0342 Rcas_0342 Rcas_0308 Rcas_0308 Rcas_0305 Rcas_0305 Rcas_0300 Rcas_0300 Rcas_0249 Rcas_0249 Rcas_0210 Rcas_0210 Rcas_0202 Rcas_0202 Rcas_0179 Rcas_0179 Rcas_0150 Rcas_0150 Rcas_0125 Rcas_0125 Rcas_0112 Rcas_0112 Rcas_0080 Rcas_0080 Rcas_0030 Rcas_0030 Rcas_0021 Rcas_0021 Rcas_0020 Rcas_0020 Rcas_0016 Rcas_0016 Rcas_0982 Rcas_0982 Rcas_0984 Rcas_0984 Rcas_1048 Rcas_1048 Rcas_1052 Rcas_1052 Rcas_1078 Rcas_1078 Rcas_1085 Rcas_1085 Rcas_1109 Rcas_1109 Rcas_1123 Rcas_1123 Rcas_1127 Rcas_1127 Rcas_1138 Rcas_1138 Rcas_1162 Rcas_1162 Rcas_1182 Rcas_1182 Rcas_1198 Rcas_1198 Rcas_1199 Rcas_1199 hemH hemH menG menG sbcD sbcD Rcas_1337 Rcas_1337 Rcas_1420 Rcas_1420
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Rcas_4329KEGG: rrs:RoseRS_0213 hypothetical protein. (388 aa)
rplTRibosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa)
Rcas_1439KEGG: rrs:RoseRS_1037 hypothetical protein. (610 aa)
Rcas_1452PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_2166 ATPase associated with various cellular activities, AAA_5. (296 aa)
Rcas_1459PFAM: cytochrome oxidase assembly; KEGG: rrs:RoseRS_4134 cytochrome oxidase assembly. (337 aa)
Rcas_1461Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_4137 arginase; Belongs to the arginase family. (299 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (466 aa)
Rcas_1523PFAM: Sterol-binding domain protein; KEGG: rrs:RoseRS_3405 hypothetical protein. (112 aa)
bchLLight-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. (273 aa)
Rcas_1542KEGG: rrs:RoseRS_1904 magnesium chelatase, H subunit; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase. (1283 aa)
Rcas_1544Magnesium chelatase ATPase subunit I; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. (377 aa)
Rcas_1551TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rrs:RoseRS_1963 2-isopropylmalate synthase/homocitrate synthase family protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. (536 aa)
pheAPFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_1964 prephenate dehydratase. (279 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (556 aa)
Rcas_1570KEGG: rrs:RoseRS_0928 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase. (396 aa)
Rcas_1586KEGG: rrs:RoseRS_0944 Zn-dependent hydrolase of the beta-lactamase fold-like protein. (277 aa)
Rcas_1618KEGG: rrs:RoseRS_1331 hypothetical protein. (755 aa)
ychFGTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (360 aa)
rpsPPFAM: ribosomal protein S16; KEGG: rrs:RoseRS_1287 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (93 aa)
Rcas_1730TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: rrs:RoseRS_2141 small GTP-binding protein. (176 aa)
Rcas_1751Domain of unknown function DUF1731; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; domain of unknown function DUF1731; KEGG: rrs:RoseRS_2118 domain of unknown function DUF1731. (311 aa)
Rcas_1766PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_2479 ABC-2 type transporter. (370 aa)
Rcas_1777PFAM: Hydantoinase B/oxoprolinase; KEGG: rrs:RoseRS_2092 hydantoinase B/oxoprolinase. (737 aa)
Rcas_17785-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rrs:RoseRS_2091 5-oxoprolinase (ATP-hydrolyzing). (715 aa)
Rcas_1784PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2084 AMP-dependent synthetase and ligase. (590 aa)
Rcas_1864PFAM: amine oxidase; KEGG: rrs:RoseRS_2594 amine oxidase. (478 aa)
Rcas_1888PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2971 acyl-CoA dehydrogenase domain protein. (418 aa)
Rcas_1889PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2972 acyl-CoA dehydrogenase domain protein. (364 aa)
Rcas_1890PFAM: Sterol-binding domain protein; KEGG: rrs:RoseRS_2973 hypothetical protein. (183 aa)
Rcas_1963PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_2925 amine oxidase. (446 aa)
Rcas_19685-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: rrs:RoseRS_2708 5-oxoprolinase (ATP-hydrolyzing). (528 aa)
Rcas_2012Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (322 aa)
pdhAPyruvate dehydrogenase (acetyl-transferring); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (353 aa)
Rcas_2022Amidohydrolase; KEGG: rrs:RoseRS_1741 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein. (396 aa)
Rcas_2024Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (490 aa)
hemAGlutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (425 aa)
hemH-2Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (313 aa)
Rcas_2040KEGG: rrs:RoseRS_1758 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein. (428 aa)
Rcas_2055PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_1099 glycosyl transferase, family 39. (729 aa)
Rcas_2072KEGG: rrs:RoseRS_1482 hypothetical protein. (378 aa)
Rcas_2073TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rrs:RoseRS_1483 cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (308 aa)
Rcas_2074PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mva:Mvan_4388 amine oxidase. (479 aa)
Rcas_2075PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_1484 alcohol dehydrogenase, zinc-binding domain protein. (322 aa)
nuoHNADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (452 aa)
nuoN1Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (540 aa)
Rcas_2108TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_3007 putative agmatinase; Belongs to the arginase family. (316 aa)
fniIsopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (345 aa)
Rcas_2259PFAM: diacylglycerol kinase catalytic region; KEGG: rrs:RoseRS_1632 diacylglycerol kinase, catalytic region. (364 aa)
Rcas_2282KEGG: rrs:RoseRS_1523 hypothetical protein. (305 aa)
Rcas_2311PFAM: GCN5-related N-acetyltransferase; KEGG: rxy:Rxyl_2877 GCN5-related N-acetyltransferase. (164 aa)
Rcas_2358PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_2479 ABC-2 type transporter. (376 aa)
Rcas_2410Pyruvate carboxyltransferase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family. (336 aa)
Rcas_2461PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2850 acyl-CoA dehydrogenase domain protein. (381 aa)
Rcas_2474PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rrs:RoseRS_2839 Orn/DAP/Arg decarboxylase 2. (528 aa)
Rcas_2509PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_1835 ATPase associated with various cellular activities, AAA_3. (315 aa)
Rcas_2520Magnesium transporter; Acts as a magnesium transporter. (454 aa)
Rcas_2550PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2274 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (384 aa)
Rcas_2554Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: rrs:RoseRS_2814 alpha-L-fucosidase. (478 aa)
Rcas_2584KEGG: rrs:RoseRS_2803 chromosome segregation ATPase-like protein. (928 aa)
Rcas_2677PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: rrs:RoseRS_3013 RNA-directed DNA polymerase (reverse transcriptase). (447 aa)
Rcas_2685PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rrs:RoseRS_2500 CMP/dCMP deaminase, zinc-binding. (190 aa)
Rcas_2760PFAM: diacylglycerol kinase catalytic region; KEGG: rrs:RoseRS_2518 diacylglycerol kinase, catalytic region. (304 aa)
nthDNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (219 aa)
Rcas_2767KEGG: rrs:RoseRS_2525 magnesium chelatase, H subunit; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase. (1251 aa)
Rcas_2851Alpha-mannosidase; PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: rrs:RoseRS_1434 alpha-mannosidase. (1061 aa)
Rcas_2852PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_1433 arginase/agmatinase/formiminoglutamase; Belongs to the arginase family. (337 aa)
Rcas_2854PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1431 GCN5-related N-acetyltransferase. (323 aa)
Rcas_2878PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2904 acyl-CoA dehydrogenase domain protein. (557 aa)
Rcas_2912PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_3184 ATPase associated with various cellular activities, AAA_3. (318 aa)
Rcas_2918PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_3190 histone deacetylase superfamily. (345 aa)
Rcas_2934KEGG: rrs:RoseRS_3206 hypothetical protein. (700 aa)
Rcas_2938PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_3092 thioesterase superfamily protein. (131 aa)
Rcas_2962KEGG: rrs:RoseRS_3116 Zn-dependent hydrolase of the beta-lactamase fold-like protein. (220 aa)
Rcas_2984Helicase superfamily 1 and 2 ATP-binding; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_2921 DEAD/DEAH box helicase domain protein. (862 aa)
Rcas_3018KEGG: rrs:RoseRS_2041 hypothetical protein. (390 aa)
Rcas_3019KEGG: rrs:RoseRS_2042 hypothetical protein. (319 aa)
Rcas_3029KEGG: rrs:RoseRS_2052 hypothetical protein. (255 aa)
Rcas_3051PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2427 GCN5-related N-acetyltransferase. (292 aa)
Rcas_3062PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_2416 transketolase, central region. (327 aa)
Rcas_3063PFAM: dehydrogenase E1 component; KEGG: rrs:RoseRS_2415 pyruvate dehydrogenase (acetyl-transferring). (333 aa)
Rcas_3122KEGG: rrs:RoseRS_2357 hypothetical protein. (392 aa)
Rcas_3165PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2300 acyl-CoA dehydrogenase domain protein. (445 aa)
Rcas_3167PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_2298 electron transfer flavoprotein, alpha subunit. (328 aa)
Rcas_3169PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2296 stage II sporulation E family protein. (192 aa)
purDKEGG: rrs:RoseRS_2692 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; oxidoreductase domain protein; protein of unknown function DUF201; Belongs to the GARS family. (418 aa)
Rcas_3224PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3921 alcohol dehydrogenase GroES domain protein. (317 aa)
Rcas_3230TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: rrs:RoseRS_3915 protein of unknown function, ATP binding. (177 aa)
Rcas_44265-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rrs:RoseRS_4325 5-oxoprolinase (ATP-hydrolyzing). (692 aa)
Rcas_4339KEGG: rrs:RoseRS_0200 hypothetical protein. (191 aa)
Rcas_4326KEGG: rrs:RoseRS_0214 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase. (563 aa)
rplKRibosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (141 aa)
cysCSulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate. (569 aa)
ybeYProtein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (159 aa)
Rcas_4262PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_0168 aminotransferase, class V. (395 aa)
Rcas_4254KEGG: rrs:RoseRS_0006 hypothetical protein. (243 aa)
Rcas_4252PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_0008 phosphoglycerate mutase. (245 aa)
Rcas_4224PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRA0622 putative acetyltransferase. (170 aa)
Rcas_4220PFAM: aminoglycoside phosphotransferase; KEGG: sma:SAV5110 putative phosphotransferase. (315 aa)
Rcas_4216KEGG: rrs:RoseRS_0026 isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Anthranilate synthase component I and chorismate binding protein. (486 aa)
Rcas_4210PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_0032 stage II sporulation E family protein. (361 aa)
mtaDAmidohydrolase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family. (663 aa)
Rcas_4173PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_4311 acyl-CoA dehydrogenase domain protein. (573 aa)
Rcas_4143PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_3363 phosphatidate cytidylyltransferase. (234 aa)
Rcas_4092PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_0904 protein of unknown function DUF323. (253 aa)
Rcas_4086KEGG: rrs:RoseRS_0883 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. (362 aa)
nifHNitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. (273 aa)
rpsSRibosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (95 aa)
rplFRibosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (187 aa)
adk-2Nucleoside-triphosphate--adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (226 aa)
rpmJPFAM: ribosomal protein L36; KEGG: rrs:RoseRS_1162 ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (38 aa)
rpsMRibosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. (127 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (270 aa)
Rcas_3973PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_1133 FAD dependent oxidoreductase. (450 aa)
Rcas_3935acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. (650 aa)
Rcas_3934acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. (639 aa)
Rcas_3909PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: rrs:RoseRS_1351 ornithine cyclodeaminase. (326 aa)
Rcas_3885KEGG: rrs:RoseRS_0854 hypothetical protein. (765 aa)
Rcas_3829TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_1953 acetoacetyl-CoA synthase. (657 aa)
Rcas_3818PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_1888 ATPase associated with various cellular activities, AAA_3. (334 aa)
Rcas_3811PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_0966 beta-lactamase domain protein. (269 aa)
Rcas_3792KEGG: sth:STH567 hypothetical protein. (382 aa)
Rcas_3773PFAM: acetyl-CoA hydrolase/transferase; KEGG: rrs:RoseRS_0911 acetyl-CoA hydrolase/transferase. (431 aa)
Rcas_3751TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; KEGG: rrs:RoseRS_3265 geranylgeranyl reductase. (406 aa)
pdxSPyridoxine biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (293 aa)
Rcas_3713Holliday junction resolvase YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (146 aa)
Rcas_3619TIGRFAM: redox-active disulfide protein 2; KEGG: rrs:RoseRS_1708 redox-active disulfide protein 2. (79 aa)
Rcas_3617PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_3945 beta-lactamase domain protein; Belongs to the UPF0173 family. (244 aa)
Rcas_3615Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: rrs:RoseRS_3943 alpha-L-fucosidase. (429 aa)
Rcas_3613PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: rrs:RoseRS_3941 NADP oxidoreductase, coenzyme F420-dependent. (205 aa)
Rcas_3608PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rrs:RoseRS_3934 5-carboxymethyl-2-hydroxymuconate delta-isomerase. (288 aa)
Rcas_3599PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_0959 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (111 aa)
Rcas_3598Electron-transferring-flavoprotein dehydrogenase; PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_0958 electron-transferring-flavoprotein dehydrogenase. (438 aa)
Rcas_3597PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_0957 electron transfer flavoprotein, alpha subunit. (342 aa)
hppAV-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force. (779 aa)
Rcas_3553PFAM: Cupin 2 conserved barrel domain protein; KEGG: rrs:RoseRS_2268 cupin 2, conserved barrel domain protein. (111 aa)
Rcas_3544Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (163 aa)
Rcas_3532PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rrs:RoseRS_3707 isoprenylcysteine carboxyl methyltransferase. (193 aa)
Rcas_3518PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: acr:Acry_2696 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (400 aa)
Rcas_3515PFAM: pyruvate carboxyltransferase; KEGG: sru:SRU_1246 3-hydroxy-3-methylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family. (297 aa)
Rcas_3495Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_0050 formyl-CoA transferase; Belongs to the CoA-transferase III family. (402 aa)
Rcas_3494PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_0049 pyruvate carboxyltransferase. (317 aa)
Rcas_34935-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: nar:Saro_0176 5-oxoprolinase (ATP-hydrolyzing). (681 aa)
Rcas_34925-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: nar:Saro_0175 5-oxoprolinase (ATP-hydrolyzing). (645 aa)
Rcas_3485PFAM: protein of unknown function UPF0047; KEGG: rrs:RoseRS_2157 protein of unknown function UPF0047. (139 aa)
lysYN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of [LysW]- aminoadipate 6-phosphate to yield [LysW]-aminoadipate 6-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. LysY sub-subfamily. (348 aa)
Rcas_3467PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_1061 pyruvate carboxyltransferase. (707 aa)
lysZAcetylglutamate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily. (267 aa)
Rcas_3449PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: rrs:RoseRS_1583 ATP dependent DNA ligase. (544 aa)
Rcas_3448PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_1584 histone deacetylase superfamily. (297 aa)
Rcas_3445PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1599 phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. (223 aa)
Rcas_3443KEGG: rrs:RoseRS_1601 hypothetical protein. (655 aa)
Rcas_3441PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_1603 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (347 aa)
Rcas_3401Hypothetical protein. (95 aa)
adkAdenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (220 aa)
nuoH-2NADH dehydrogenase (quinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (390 aa)
nuoN2Proton-translocating NADH-quinone oxidoreductase, chain N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (498 aa)
nadDNicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (199 aa)
Rcas_3364PFAM: ADP-ribosylation/Crystallin J1; KEGG: rrs:RoseRS_2215 ADP-ribosylation/crystallin J1. (705 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (361 aa)
argCN-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. (336 aa)
argBAcetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. (259 aa)
Rcas_3360PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4054 GCN5-related N-acetyltransferase. (171 aa)
argJArginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (407 aa)
Rcas_3335PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_1007 AMP-dependent synthetase and ligase. (512 aa)
tsaDPutative metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (362 aa)
Rcas_0981TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: rrs:RoseRS_0431 hydroxymethylglutaryl-CoA reductase, degradative; Belongs to the HMG-CoA reductase family. (444 aa)
Rcas_0962KEGG: rrs:RoseRS_3483 hypothetical protein. (175 aa)
Rcas_0926KEGG: rrs:RoseRS_3342 ATPase involved in chromosome partitioning-like protein. (351 aa)
Rcas_0911KEGG: rrs:RoseRS_4174 acyl-CoA transferase/carnitine dehydratase-like protein; Belongs to the CoA-transferase III family. (408 aa)
Rcas_0910PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_4175 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (405 aa)
Rcas_0909PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_4176 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family. (479 aa)
Rcas_0864KEGG: rrs:RoseRS_0322 hypothetical protein. (629 aa)
Rcas_0848PFAM: Patatin; KEGG: rrs:RoseRS_0335 patatin. (377 aa)
Rcas_0828PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rrs:RoseRS_4477 cobalamin (vitamin B12) biosynthesis CbiX protein. (304 aa)
Rcas_0816PFAM: Cupin 2 conserved barrel domain protein; KEGG: rrs:RoseRS_4464 hypothetical protein. (106 aa)
Rcas_0807PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_4454 alcohol dehydrogenase GroES domain protein. (346 aa)
Rcas_0695PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: rrs:RoseRS_0158 peptidase M16C associated domain protein. (968 aa)
Rcas_0654PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_0536 ATPase associated with various cellular activities, AAA_5. (326 aa)
Rcas_0648KEGG: rrs:RoseRS_0558 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase. (1409 aa)
Rcas_0644PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rrs:RoseRS_0565 cobalamin (vitamin B12) biosynthesis CbiX protein. (472 aa)
Rcas_0594PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_4162 pyruvate carboxyltransferase. (313 aa)
Rcas_0583PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_4146 acyl-CoA dehydrogenase domain protein. (379 aa)
Rcas_0558Formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_3860 formyl-CoA transferase; Belongs to the CoA-transferase III family. (396 aa)
Rcas_0551Phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; KEGG: rrs:RoseRS_0351 phosphoribosylamine--glycine ligase. (455 aa)
nfoApurinic endonuclease Apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (289 aa)
Rcas_0545PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_0623 AMP-dependent synthetase and ligase. (649 aa)
fhsPFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: rrs:RoseRS_0219 formate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. (564 aa)
Rcas_0511PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rrs:RoseRS_3624 methylated-DNA-(protein)-cysteine S-methyltransferase. (104 aa)
Rcas_0439PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rrs:RoseRS_4208 fumarylacetoacetate (FAA) hydrolase. (340 aa)
Rcas_0437KEGG: rrs:RoseRS_4206 hypothetical protein. (315 aa)
Rcas_0434PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rrs:RoseRS_4203 cytochrome c biogenesis protein, transmembrane region. (305 aa)
Rcas_0386SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_4596 protein kinase. (785 aa)
Rcas_0342PFAM: acyl-coA-binding protein ACBP; KEGG: rrs:RoseRS_0103 acyl-coA-binding protein, ACBP. (85 aa)
Rcas_0308TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: rrs:RoseRS_0712 FeS assembly protein SufB. (471 aa)
Rcas_0305TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: rrs:RoseRS_0709 FeS assembly protein SufD. (405 aa)
Rcas_0300PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rrs:RoseRS_0704 6-pyruvoyl tetrahydropterin synthase and hypothetical protein. (280 aa)
Rcas_0249PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_0319 acyl-CoA dehydrogenase domain protein. (383 aa)
Rcas_0210PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_0692 ATPase associated with various cellular activities, AAA_3. (347 aa)
Rcas_0202PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3870 glycosyl transferase, family 2. (257 aa)
Rcas_0179PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0088 amine oxidase. (448 aa)
Rcas_0150PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_0478 acyl-CoA dehydrogenase domain protein. (394 aa)
Rcas_0125PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_4578 protein of unknown function DUF323. (781 aa)
Rcas_0112PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_4565 stage II sporulation E family protein. (251 aa)
Rcas_0080KEGG: jan:Jann_4252 hypothetical protein. (338 aa)
Rcas_0030PFAM: deoxynucleoside kinase; KEGG: rrs:RoseRS_0778 deoxynucleoside kinase. (217 aa)
Rcas_0021KEGG: rrs:RoseRS_4525 hypothetical protein. (379 aa)
Rcas_0020PFAM: amidinotransferase; KEGG: rrs:RoseRS_4521 amidinotransferase. (293 aa)
Rcas_0016PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_4520 thioesterase superfamily protein. (179 aa)
Rcas_0982TIGRFAM: putative hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: rrs:RoseRS_0430 putative hydroxymethylglutaryl-CoA synthase. (348 aa)
Rcas_0984PFAM: protein of unknown function DUF35; KEGG: rrs:RoseRS_0428 protein of unknown function DUF35. (132 aa)
Rcas_1048Hypothetical protein; KEGG: mgi:Mflv_5589 aminoglycoside nucleotidyltransferase. (146 aa)
Rcas_1052PFAM: Cupin 2 conserved barrel domain protein; KEGG: aba:Acid345_2510 conserved hypothetical protein, cupin barrel. (131 aa)
Rcas_1078PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_3805 histone deacetylase superfamily. (346 aa)
Rcas_1085KEGG: rrs:RoseRS_3796 hypothetical protein. (866 aa)
Rcas_1109PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_3775 acyl-CoA dehydrogenase domain protein. (388 aa)
Rcas_1123PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3761 glycosyl transferase, family 2. (251 aa)
Rcas_1127TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: rrs:RoseRS_3756 riboflavin biosynthesis protein RibF; Belongs to the ribF family. (311 aa)
Rcas_1138PFAM: Ribosomal small subunit Rsm22; KEGG: rrs:RoseRS_3744 rRNA methylase-like protein. (354 aa)
Rcas_1162PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_0588 beta-lactamase domain protein. (257 aa)
Rcas_1182PFAM: SufBD protein; KEGG: rrs:RoseRS_0811 SufBD protein. (331 aa)
Rcas_1198PFAM: Patatin; KEGG: rrs:RoseRS_2164 patatin. (394 aa)
Rcas_1199KEGG: rrs:RoseRS_4071 hypothetical protein. (246 aa)
hemHFerrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (320 aa)
menGUbiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (238 aa)
sbcDNuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (418 aa)
Rcas_1337PFAM: Acetamidase/Formamidase; KEGG: rrs:RoseRS_3551 acetamidase/formamidase. (312 aa)
Rcas_1420KEGG: mba:Mbar_A1776 magnesium-chelatase subunit; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase. (364 aa)
Your Current Organism:
Roseiflexus castenholzii
NCBI taxonomy Id: 383372
Other names: R. castenholzii DSM 13941, Roseiflexus castenholzii DSM 13941, Roseiflexus castenholzii HLO8, Roseiflexus castenholzii str. DSM 13941, Roseiflexus castenholzii strain DSM 13941
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