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| | PSEEN0080 | Putative cytochrome c4; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (205 aa) |
| | cyaY | Conserved hypothetical protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis. (110 aa) |
| | PSEEN5378 | Putative molybdenum-pterin binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (142 aa) |
| | PSEEN5413 | Putative cytochrome c5; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (134 aa) |
| | rubA | Rubredoxin; Function of homologous gene experimentally demonstrated in an other organism; carrier. (55 aa) |
| | PSEEN5529 | Putative cytochrome P450; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the cytochrome P450 family. (477 aa) |
| | fda | Fructose-1,6-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (354 aa) |
| | PSEEN5029 | Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (144 aa) |
| | hisI | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. (130 aa) |
| | hutI | Imidazolonepropionase; Function of strongly homologous gene; enzyme; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (401 aa) |
| | bioB | Biotin synthetase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (352 aa) |
| | PSEEN5123 | Putative molybdate transport regulator ModE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (254 aa) |
| | fdhA | Formaldehyde dehydrogenase, glutathione-independent; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (399 aa) |
| | PSEEN5169 | Putative iron-sulfur cluster-binding protein, Rieske family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (430 aa) |
| | PSEEN5200 | Putative Fe(II) trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. (90 aa) |
| | PSEEN5226 | Copper-containing nitrite reductase (NO-forming); Function of strongly homologous gene; enzyme; Belongs to the multicopper oxidase family. (380 aa) |
| | PSEEN5252 | Putative oxidoreductase, 2OG-Fe(II) oxygenase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (207 aa) |
| | hemB | Delta-aminolevulinic acid dehydratase (Porphobilinogen synthase); Function of strongly homologous gene; enzyme; Belongs to the ALAD family. (336 aa) |
| | PSEEN5339 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (431 aa) |
| | PSEEN4993 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (467 aa) |
| | thiC | Hydroxymethylpyrimidine moiety synthesis in thiamin biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. (626 aa) |
| | PSEEN4925 | Putative Fe-S oxidase, SAM-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (765 aa) |
| | PSEEN4921 | Azurin; Transfers electrons from cytochrome c551 to cytochrome oxidase. (149 aa) |
| | PSEEN4905 | Putative bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (175 aa) |
| | ybeY | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (157 aa) |
| | pcaH | Protocatechuate 3,4-dioxygenase beta chain (3,4-PCD); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (239 aa) |
| | pcaG | Protocatechuate 3,4-dioxygenase alpha chain (3,4-PCD); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (201 aa) |
| | gluQ | glutamyl-tRNA synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily. (295 aa) |
| | dskA | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. (147 aa) |
| | PSEEN4718 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (92 aa) |
| | ileS | isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. (943 aa) |
| | PSEEN4679 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the multicopper oxidase YfiH/RL5 family. (245 aa) |
| | yacG | Conserved hypothetical protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. (66 aa) |
| | metE | 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (762 aa) |
| | hmgA | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (433 aa) |
| | gmhA | Phosphoheptose isomerase with phosphosugar-binding domain; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (197 aa) |
| | pepA | Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (497 aa) |
| | cumA | Mn2+ multicopper oxidase CumA; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (460 aa) |
| | tadA | Putative cytidine/deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (145 aa) |
| | PSEEN4325 | Putative esterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (511 aa) |
| | dapE | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. (383 aa) |
| | map | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (260 aa) |
| | rnhB | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (207 aa) |
| | adhC-2 | Alcohol dehydrogenase class III; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (370 aa) |
| | PSEEN4176 | Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin. (254 aa) |
| | PSEEN4099 | Putative DNA-binding stress protein, Dps family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the Dps family. (157 aa) |
| | queC | Conserved hypothetical protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (224 aa) |
| | PSEEN4070 | Putative peptidase M48 family; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. (478 aa) |
| | PSEEN4042 | Putative molybdopterin oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (775 aa) |
| | PSEEN3923 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0149 family. (195 aa) |
| | phhA | Phenylalanine-4-hydroxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (262 aa) |
| | alaS | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (874 aa) |
| | acnA | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (913 aa) |
| | PSEEN3734 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (267 aa) |
| | PSEEN3703 | Putative copper-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (172 aa) |
| | cynT-1 | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (219 aa) |
| | PSEEN3543 | Putative RNA polymerase-binding protein DksA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor. (134 aa) |
| | pcoB | Copper resistance protein B; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (301 aa) |
| | pcoA | Copper resistance protein A precursor; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (575 aa) |
| | nuoI | NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (182 aa) |
| | nuoB | NADH dehydrogenase I chain B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (225 aa) |
| | PSEEN3393 | Putative Zinc-dependent carboxypeptidase (M14 family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (382 aa) |
| | metH | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1235 aa) |
| | nfuA | Conserved hypothetical protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. (194 aa) |
| | PSEEN3317 | Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (120 aa) |
| | PSEEN3297 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (226 aa) |
| | PSEEN3194 | Putative deaminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (152 aa) |
| | benA | Benzoate 1,2-dioxygenase alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (452 aa) |
| | catB | Muconate cycloisomerase I (Cis,cis-muconate lactonizing enzyme I) (MLE); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (374 aa) |
| | catA | Catechol 1,2-dioxygenase; Function of strongly homologous gene; enzyme. (304 aa) |
| | dksA | Putative RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. (135 aa) |
| | crtZ | Beta-carotene hydroxylase; Function of strongly homologous gene; enzyme. (154 aa) |
| | hpaD | 3,4-dihydroxyphenylacetate 2,3-dioxygenase (Homoprotocatechuate 2,3-dioxygenase) (HPC dioxygenase); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (307 aa) |
| | ccd | Cytosine deaminase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (141 aa) |
| | ribB/A-2 | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. (370 aa) |
| | PSEEN2892 | Hypothetical protein; No homology to any previously reported sequences. (242 aa) |
| | PSEEN2875 | Putative oxidase, large subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (943 aa) |
| | PSEEN2873 | Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (403 aa) |
| | PSEEN2857 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (1947 aa) |
| | PSEEN2764 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (256 aa) |
| | PSEEN2747 | Putative 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (342 aa) |
| | PSEEN2731 | Putative alcohol dehydrogenase, zinc-containing; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. (335 aa) |
| | PSEEN2685 | Putative cation transporter, CorA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (338 aa) |
| | PSEEN2684 | Putative alcohol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (339 aa) |
| | rnz | Putative Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (320 aa) |
| | PSEEN2643 | Conserved hypothetical protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (550 aa) |
| | PSEEN2620 | Putative excinuclease ABC, UvrA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (883 aa) |
| | adhC-1 | Glutathione-dependent formaldehyde dehydrogenase (alcohol dehydrogenase class III); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa) |
| | PSEEN2585 | Putative class II aldolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (267 aa) |
| | PSEEN2569 | Putative DNA-3-methyladenine glycosylase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (508 aa) |
| | PSEEN2557 | Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (200 aa) |
| | folE | Putative GTP cyclohydrolase I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (202 aa) |
| | PSEEN2471 | Hypothetical protein; No homology to any previously reported sequences. (235 aa) |
| | PSEEN2409 | Putative molybdopterin oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (774 aa) |
| | PSEEN2292 | Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (216 aa) |
| | PSEEN2249 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (142 aa) |
| | nudC | Putative NTP pyrophosphohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (276 aa) |
| | PSEEN2170 | Putative cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (444 aa) |
| | PSEEN2155 | Putative unspecific monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (469 aa) |
| | PSEEN2130 | Putative dioxygenase, alpha subunit; Converts carnitine to trimethylamine and malic semialdehyde. (373 aa) |
| | PSEEN2124 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (1131 aa) |
| | ureG | Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG. (207 aa) |
| | ureF | Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (224 aa) |
| | ureE | Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. (159 aa) |
| | ureC | Urease alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (567 aa) |
| | ureA | Urease gamma subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the urease gamma subunit family. (100 aa) |
| | ureD | Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (277 aa) |
| | cysS | cysteinyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family. (460 aa) |
| | lpxH | UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (240 aa) |
| | PSEEN2023 | Cobalt-zinc-cadmium resistance protein CzcB; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (405 aa) |
| | PSEEN1935 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (232 aa) |
| | clpX | ATP-dependent Clp protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (442 aa) |
| | PSEEN1796 | Putative copper-transporting P-type ATPase CcoI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (823 aa) |
| | PSEEN1765 | Putative xanthine dehydrogenase, small subunit XhdA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (484 aa) |
| | PSEEN1764 | Putative xanthine dehydrogenase, large subunit XhdB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (799 aa) |
| | guaD | Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. (434 aa) |
| | PSEEN1745 | Putative metal ion transporter CmaX protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter. (331 aa) |
| | PSEEN1732 | Hypothetical protein; No homology to any previously reported sequences. (98 aa) |
| | pepN | Function of strongly homologous gene; enzyme. (885 aa) |
| | accD | acetylCoA carboxylase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (297 aa) |
| | gltX | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (493 aa) |
| | PSEEN1634 | Hypothetical protein; No homology to any previously reported sequences. (404 aa) |
| | rne | Putative ribonuclease E Rne; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (1075 aa) |
| | msrB | Peptide methionine sulfoxide reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the MsrB Met sulfoxide reductase family. (131 aa) |
| | htpX | Heat shock protein HtpX; Function of strongly homologous gene; factor; Belongs to the peptidase M48B family. (295 aa) |
| | PSEEN1580 | Putative aromatic ring-opening dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (250 aa) |
| | aprA | Alkaline metalloprotease precursor AprA; Secreted protease which is important for P.entomophila to counteract the local immune response of Drosophila. Can degrade antimicrobial peptides (AMPs), e.g. Diptericin and Cecropin A. Thus, protects P.entomophila from the Drosophila antimicrobial peptides produced by the gut innate immune response, and promotes bacterial persistence in the Drosophila gut and killing of the host. Is responsible for maturation of pro-Monalysin to the active toxin Monalysin, by cleaving its N-terminus ; Belongs to the peptidase M10B family. (485 aa) |
| | PSEEN1531 | Putative oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (178 aa) |
| | folE2 | GTP cyclohydrolase I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (181 aa) |
| | apeB | Putative aminopeptidase, M18 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (429 aa) |
| | PSEEN1429 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (124 aa) |
| | map-2 | Putative methionine aminopeptidase, type I Map; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. (258 aa) |
| | rumA | 23S rRNA m5U1939 methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. (452 aa) |
| | sprT | Putative metallopeptidase, SprT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the SprT family. (164 aa) |
| | nrdB | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (415 aa) |
| | PSEEN1320 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0149 family. (184 aa) |
| | PSEEN1309 | Putative Zinc-dependent hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (352 aa) |
| | PSEEN1227 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (67 aa) |
| | pyrC | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. (348 aa) |
| | bfrB | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (157 aa) |
| | hisD | Histidinol dehydrogenase (also histidinol dehydrogenase activity); Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. (440 aa) |
| | sodM | Superoxide dismutase [Mn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (203 aa) |
| | PSEEN1031 | Putative PKHD-type hydroxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (226 aa) |
| | ispG | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. (369 aa) |
| | PSEEN1016 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (66 aa) |
| | iscU | Iron-sulfur cluster assembly protein IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. (128 aa) |
| | PSEEN0975 | Hypothetical protein; No homology to any previously reported sequences. (340 aa) |
| | cyoA | Cytochrome o ubiquinol oxidase subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (314 aa) |
| | ada | O6-methylguanine-DNA methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (352 aa) |
| | ftsH | ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (635 aa) |
| | dnaJ | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] (375 aa) |
| | fur | Transcriptional repressor for ferric uptake; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the Fur family. (134 aa) |
| | add | Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. (316 aa) |
| | PSEEN0673 | Putative transcriptional regulator, ArsR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (236 aa) |
| | ribB | 3,4 dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (216 aa) |
| | ribA | GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. (205 aa) |
| | ribB/A | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. (363 aa) |
| | ribD | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. (375 aa) |
| | nrdR | Conserved hypothetical protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. (154 aa) |
| | fdhE | Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. (308 aa) |
| | uvrA | DNA excision repair enzyme subunit, with UvrBC; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (944 aa) |
| | bfrA | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. (154 aa) |
| | rpoC | RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1399 aa) |
| | erpA | Conserved hypothetical protein; Required for insertion of 4Fe-4S clusters for at least IspG. (116 aa) |
| | pdxA | 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase); Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). (336 aa) |
| | gcp | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (341 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (660 aa) |
| | pqqF | Coenzyme PQQ synthesis protein F; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase M16 family. (778 aa) |
| | pqqE | Coenzyme PQQ synthesis protein E (Coenzyme PQQ synthesis protein III); Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). (372 aa) |
| | gpmA | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (511 aa) |
| | priA | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (739 aa) |
| | mutM | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (270 aa) |
| | PSEEN0240 | Putative molybdopterin oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (781 aa) |
| | ssuF | Organosulfonate utilization protein SsuF; Function of homologous gene experimentally demonstrated in an other organism; factor. (71 aa) |
| | PSEEN0169 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (80 aa) |
| | PSEEN0079 | Putative cytochrome c-type protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (100 aa) |
| | PSEEN0073 | Putative Zinc ABC transporter ZnuA, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the bacterial solute-binding protein 9 family. (301 aa) |
| | fur-2 | Putative transcriptional repressor of Zn transport system Zur; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator; Belongs to the Fur family. (161 aa) |
| | PSEEN0058 | Putative cytochrome c oxidase assembly protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor. (185 aa) |
| | coxB | Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (375 aa) |
| | cynT-2 | Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (239 aa) |
