STRINGSTRING
PSEEN0100 PSEEN0100 PSEEN0298 PSEEN0298 pqqF pqqF PSEEN0299 PSEEN0299
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PSEEN0100Putative metalloprotease, M16 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (467 aa)
PSEEN0298Putative zinc-dependent peptidase, M16 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (496 aa)
pqqFCoenzyme PQQ synthesis protein F; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase M16 family. (778 aa)
PSEEN0299Putative zinc-dependent peptidase, M16 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (451 aa)
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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