STRINGSTRING
gcdH gcdH gabD gabD gabT gabT PSEEN0400 PSEEN0400 PSEEN0401 PSEEN0401 PSEEN0664 PSEEN0664 PSEEN1238 PSEEN1238 PSEEN1547 PSEEN1547 PSEEN1736 PSEEN1736 PSEEN2116 PSEEN2116 PSEEN2183 PSEEN2183 PSEEN2543 PSEEN2543 PSEEN2586 PSEEN2586 PSEEN2669 PSEEN2669 phaA phaA pcaF-2 pcaF-2 PSEEN3197 PSEEN3197 fadB1x fadB1x fadAx fadAx lpd lpd sucB sucB fadB fadB lpdV lpdV phbA phbA PSEEN5402 PSEEN5402 lpd3 lpd3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gcdHglutaryl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (393 aa)
gabDSuccinate-semialdehyde dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the aldehyde dehydrogenase family. (480 aa)
gabT4-aminobutyrate aminotransferase, PLP-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
PSEEN0400Putative amidohydrolase, carbon-nitrogen family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (264 aa)
PSEEN0401Putative amino oxydase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (560 aa)
PSEEN0664Putative acetyl-CoA acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
PSEEN1238Putative aldehyde dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the aldehyde dehydrogenase family. (474 aa)
PSEEN1547Putative enoyl-CoA hydratase/isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (229 aa)
PSEEN1736Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (397 aa)
PSEEN2116Putative monoamine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (610 aa)
PSEEN2183Putative enoyl-CoA hydratase/isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
PSEEN2543Putative 3-ketoacyl-CoA thiolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
PSEEN2586Putative aldehyde dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the aldehyde dehydrogenase family. (483 aa)
PSEEN2669Putative malate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the LDH2/MDH2 oxidoreductase family. (332 aa)
phaAenoyl-CoA hydratase/isomerase PhaA; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
pcaF-2Beta-ketoadipyl CoA thiolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
PSEEN3197Putative Acetoacetyl-CoA thiolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
fadB1xenoyl-CoA hydratase, FadB1x; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
fadAxacetyl-CoA acetyltransferase with thiolase domain FadAx; Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
lpd2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (478 aa)
sucB2-oxoglutarate dehydrogenase, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (405 aa)
fadBFatty oxidation complex alpha subunit [Includes: Enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (715 aa)
lpdV2-oxoisovalerate dehydrogenase, lipoamide dehydrogenase component; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (459 aa)
phbAacetyl-CoA acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (407 aa)
PSEEN5402Probable aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family. (496 aa)
lpd3Dihydrolipoamide dehydrogenase 3; Function of strongly homologous gene; enzyme. (461 aa)
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.