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A0A0R0HN81 A0A0R0HN81 C6SWW8_SOYBN C6SWW8_SOYBN C6SYH7_SOYBN C6SYH7_SOYBN C6T1E6_SOYBN C6T1E6_SOYBN C6T8S2_SOYBN C6T8S2_SOYBN C6TN35_SOYBN C6TN35_SOYBN I1JJ67_SOYBN I1JJ67_SOYBN I1K5I1_SOYBN I1K5I1_SOYBN I1LG22_SOYBN I1LG22_SOYBN I1MSQ9_SOYBN I1MSQ9_SOYBN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0R0HN81U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (207 aa)
C6SWW8_SOYBNSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
C6SYH7_SOYBNSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
C6T1E6_SOYBNSmall nuclear ribonucleoprotein G. (79 aa)
C6T8S2_SOYBNUncharacterized protein. (287 aa)
C6TN35_SOYBNSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (115 aa)
I1JJ67_SOYBNSmall nuclear ribonucleoprotein-associated protein. (282 aa)
I1K5I1_SOYBNSmall nuclear ribonucleoprotein Sm D2. (108 aa)
I1LG22_SOYBNUncharacterized protein. (1107 aa)
I1MSQ9_SOYBNSm domain-containing protein. (78 aa)
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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