6 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1J4U7_SOYBN	Uncharacterized protein. (289 aa)
	I1KHP4_SOYBN	Uncharacterized protein. (277 aa)
	I1M4U1_SOYBN	RRM domain-containing protein. (86 aa)
	I1M687_SOYBN	Uncharacterized protein. (479 aa)
	I1NAV4_SOYBN	Uncharacterized protein. (317 aa)
	K7MEQ2_SOYBN	RRM domain-containing protein. (277 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1J4U7_SOYBN	I1M4U1_SOYBN	I1J4U7	I1M4U1	Uncharacterized protein.	RRM domain-containing protein.	0.552
I1J4U7_SOYBN	I1M687_SOYBN	I1J4U7	I1M687	Uncharacterized protein.	Uncharacterized protein.	0.544
I1J4U7_SOYBN	K7MEQ2_SOYBN	I1J4U7	K7MEQ2	Uncharacterized protein.	RRM domain-containing protein.	0.466
I1KHP4_SOYBN	I1M4U1_SOYBN	I1KHP4	I1M4U1	Uncharacterized protein.	RRM domain-containing protein.	0.554
I1KHP4_SOYBN	I1M687_SOYBN	I1KHP4	I1M687	Uncharacterized protein.	Uncharacterized protein.	0.518
I1KHP4_SOYBN	K7MEQ2_SOYBN	I1KHP4	K7MEQ2	Uncharacterized protein.	RRM domain-containing protein.	0.447
I1M4U1_SOYBN	I1J4U7_SOYBN	I1M4U1	I1J4U7	RRM domain-containing protein.	Uncharacterized protein.	0.552
I1M4U1_SOYBN	I1KHP4_SOYBN	I1M4U1	I1KHP4	RRM domain-containing protein.	Uncharacterized protein.	0.554
I1M4U1_SOYBN	I1M687_SOYBN	I1M4U1	I1M687	RRM domain-containing protein.	Uncharacterized protein.	0.537
I1M4U1_SOYBN	I1NAV4_SOYBN	I1M4U1	I1NAV4	RRM domain-containing protein.	Uncharacterized protein.	0.534
I1M4U1_SOYBN	K7MEQ2_SOYBN	I1M4U1	K7MEQ2	RRM domain-containing protein.	RRM domain-containing protein.	0.470
I1M687_SOYBN	I1J4U7_SOYBN	I1M687	I1J4U7	Uncharacterized protein.	Uncharacterized protein.	0.544
I1M687_SOYBN	I1KHP4_SOYBN	I1M687	I1KHP4	Uncharacterized protein.	Uncharacterized protein.	0.518
I1M687_SOYBN	I1M4U1_SOYBN	I1M687	I1M4U1	Uncharacterized protein.	RRM domain-containing protein.	0.537
I1NAV4_SOYBN	I1M4U1_SOYBN	I1NAV4	I1M4U1	Uncharacterized protein.	RRM domain-containing protein.	0.534
I1NAV4_SOYBN	K7MEQ2_SOYBN	I1NAV4	K7MEQ2	Uncharacterized protein.	RRM domain-containing protein.	0.449
K7MEQ2_SOYBN	I1J4U7_SOYBN	K7MEQ2	I1J4U7	RRM domain-containing protein.	Uncharacterized protein.	0.466
K7MEQ2_SOYBN	I1KHP4_SOYBN	K7MEQ2	I1KHP4	RRM domain-containing protein.	Uncharacterized protein.	0.447
K7MEQ2_SOYBN	I1M4U1_SOYBN	K7MEQ2	I1M4U1	RRM domain-containing protein.	RRM domain-containing protein.	0.470
K7MEQ2_SOYBN	I1NAV4_SOYBN	K7MEQ2	I1NAV4	RRM domain-containing protein.	Uncharacterized protein.	0.449