16 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0FSX5	BED-type domain-containing protein. (1053 aa)
	A0A0R0GWJ1	SWIM-type domain-containing protein. (752 aa)
	A0A0R0HKM0	BED-type domain-containing protein. (759 aa)
	I1JVW1_SOYBN	SWIM-type domain-containing protein. (843 aa)
	I1KFM9_SOYBN	SWIM-type domain-containing protein. (842 aa)
	I1L023_SOYBN	SWIM-type domain-containing protein. (691 aa)
	I1L7C4_SOYBN	SWIM-type domain-containing protein. (679 aa)
	I1MD96_SOYBN	SWIM-type domain-containing protein. (743 aa)
	K7LB16_SOYBN	SWIM-type domain-containing protein. (684 aa)
	K7LJE7_SOYBN	SWIM-type domain-containing protein. (759 aa)
	K7M034_SOYBN	BED-type domain-containing protein. (1100 aa)
	K7M039_SOYBN	BED-type domain-containing protein. (1180 aa)
	K7MJV8_SOYBN	SWIM-type domain-containing protein. (748 aa)
	K7ML33_SOYBN	BED-type domain-containing protein. (1154 aa)
	K7MPQ6_SOYBN	BED-type domain-containing protein. (758 aa)
	K7N2H4_SOYBN	SWIM-type domain-containing protein. (758 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0FSX5	A0A0R0GWJ1	A0A0R0FSX5	A0A0R0GWJ1	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.534
A0A0R0FSX5	A0A0R0HKM0	A0A0R0FSX5	A0A0R0HKM0	BED-type domain-containing protein.	BED-type domain-containing protein.	0.579
A0A0R0FSX5	I1JVW1_SOYBN	A0A0R0FSX5	I1JVW1	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.524
A0A0R0FSX5	I1KFM9_SOYBN	A0A0R0FSX5	I1KFM9	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.524
A0A0R0FSX5	I1L023_SOYBN	A0A0R0FSX5	I1L023	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.463
A0A0R0FSX5	I1L7C4_SOYBN	A0A0R0FSX5	I1L7C4	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.442
A0A0R0FSX5	I1MD96_SOYBN	A0A0R0FSX5	I1MD96	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.420
A0A0R0FSX5	K7LB16_SOYBN	A0A0R0FSX5	K7LB16	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.452
A0A0R0FSX5	K7LJE7_SOYBN	A0A0R0FSX5	K7LJE7	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.538
A0A0R0FSX5	K7MJV8_SOYBN	A0A0R0FSX5	K7MJV8	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.534
A0A0R0FSX5	K7MPQ6_SOYBN	A0A0R0FSX5	K7MPQ6	BED-type domain-containing protein.	BED-type domain-containing protein.	0.578
A0A0R0FSX5	K7N2H4_SOYBN	A0A0R0FSX5	K7N2H4	BED-type domain-containing protein.	SWIM-type domain-containing protein.	0.537
A0A0R0GWJ1	A0A0R0FSX5	A0A0R0GWJ1	A0A0R0FSX5	SWIM-type domain-containing protein.	BED-type domain-containing protein.	0.534
A0A0R0GWJ1	A0A0R0HKM0	A0A0R0GWJ1	A0A0R0HKM0	SWIM-type domain-containing protein.	BED-type domain-containing protein.	0.480
A0A0R0GWJ1	I1JVW1_SOYBN	A0A0R0GWJ1	I1JVW1	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.632
A0A0R0GWJ1	I1KFM9_SOYBN	A0A0R0GWJ1	I1KFM9	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.632
A0A0R0GWJ1	I1L023_SOYBN	A0A0R0GWJ1	I1L023	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.688
A0A0R0GWJ1	I1L7C4_SOYBN	A0A0R0GWJ1	I1L7C4	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.493
A0A0R0GWJ1	I1MD96_SOYBN	A0A0R0GWJ1	I1MD96	SWIM-type domain-containing protein.	SWIM-type domain-containing protein.	0.540
A0A0R0GWJ1	K7M034_SOYBN	A0A0R0GWJ1	K7M034	SWIM-type domain-containing protein.	BED-type domain-containing protein.	0.537