STRINGSTRING
K7N3A9_SOYBN K7N3A9_SOYBN A0A0R0G4H8 A0A0R0G4H8 A0A0R0HN81 A0A0R0HN81 A0A0R0KZ95 A0A0R0KZ95 C6SVH9_SOYBN C6SVH9_SOYBN C6SWW8_SOYBN C6SWW8_SOYBN C6SYH7_SOYBN C6SYH7_SOYBN C6SYQ7_SOYBN C6SYQ7_SOYBN C6SYU8_SOYBN C6SYU8_SOYBN C6T1E6_SOYBN C6T1E6_SOYBN C6T9S5_SOYBN C6T9S5_SOYBN C6TN35_SOYBN C6TN35_SOYBN I1J8V4_SOYBN I1J8V4_SOYBN I1JDT3_SOYBN I1JDT3_SOYBN I1JFF6_SOYBN I1JFF6_SOYBN I1JJ67_SOYBN I1JJ67_SOYBN I1K5I1_SOYBN I1K5I1_SOYBN I1KBP3_SOYBN I1KBP3_SOYBN I1KSK4_SOYBN I1KSK4_SOYBN I1L5H8_SOYBN I1L5H8_SOYBN I1L690_SOYBN I1L690_SOYBN I1LCB2_SOYBN I1LCB2_SOYBN I1LHR1_SOYBN I1LHR1_SOYBN I1LJV7_SOYBN I1LJV7_SOYBN I1LP18_SOYBN I1LP18_SOYBN I1LQJ1_SOYBN I1LQJ1_SOYBN I1M508_SOYBN I1M508_SOYBN I1M6U9_SOYBN I1M6U9_SOYBN I1MSQ9_SOYBN I1MSQ9_SOYBN I1MXF9_SOYBN I1MXF9_SOYBN I1N9G0_SOYBN I1N9G0_SOYBN I1NI35_SOYBN I1NI35_SOYBN K7K3W4_SOYBN K7K3W4_SOYBN K7KFI9_SOYBN K7KFI9_SOYBN K7LLE8_SOYBN K7LLE8_SOYBN K7LUT6_SOYBN K7LUT6_SOYBN GLYMA_U029000 GLYMA_U029000 K7MYR3_SOYBN K7MYR3_SOYBN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
K7N3A9_SOYBNUncharacterized protein. (1020 aa)
A0A0R0G4H8Uncharacterized protein. (294 aa)
A0A0R0HN81U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (207 aa)
A0A0R0KZ95Uncharacterized protein. (195 aa)
C6SVH9_SOYBNSmall nuclear ribonucleoprotein G. (79 aa)
C6SWW8_SOYBNSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
C6SYH7_SOYBNSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
C6SYQ7_SOYBNSm domain-containing protein. (88 aa)
C6SYU8_SOYBNSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
C6T1E6_SOYBNSmall nuclear ribonucleoprotein G. (79 aa)
C6T9S5_SOYBNUncharacterized protein. (414 aa)
C6TN35_SOYBNSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (115 aa)
I1J8V4_SOYBNRRM domain-containing protein. (481 aa)
I1JDT3_SOYBNSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (116 aa)
I1JFF6_SOYBNU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (206 aa)
I1JJ67_SOYBNSmall nuclear ribonucleoprotein-associated protein. (282 aa)
I1K5I1_SOYBNSmall nuclear ribonucleoprotein Sm D2. (108 aa)
I1KBP3_SOYBNSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
I1KSK4_SOYBNUncharacterized protein. (1079 aa)
I1L5H8_SOYBNUncharacterized protein. (342 aa)
I1L690_SOYBNUncharacterized protein. (414 aa)
I1LCB2_SOYBNSmall nuclear ribonucleoprotein Sm D2. (108 aa)
I1LHR1_SOYBNRRM domain-containing protein. (482 aa)
I1LJV7_SOYBNUncharacterized protein. (401 aa)
I1LP18_SOYBNUncharacterized protein. (346 aa)
I1LQJ1_SOYBNUncharacterized protein. (401 aa)
I1M508_SOYBNUncharacterized protein. (419 aa)
I1M6U9_SOYBNSmall nuclear ribonucleoprotein-associated protein. (281 aa)
I1MSQ9_SOYBNSm domain-containing protein. (78 aa)
I1MXF9_SOYBNUncharacterized protein. (1008 aa)
I1N9G0_SOYBNSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
I1NI35_SOYBNSmall nuclear ribonucleoprotein Sm D2. (98 aa)
K7K3W4_SOYBNRRM domain-containing protein. (110 aa)
K7KFI9_SOYBNUncharacterized protein. (828 aa)
K7LLE8_SOYBNUncharacterized protein. (1017 aa)
K7LUT6_SOYBNSmall nuclear ribonucleoprotein Sm D2. (88 aa)
GLYMA_U029000Uncharacterized protein. (1002 aa)
K7MYR3_SOYBNUncharacterized protein. (828 aa)
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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