(64 nodes) Thylakoid membrane organization network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0EYD4	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (361 aa)
	A0A0R0F7V7	Protein phosphatase; Belongs to the PP2C family. (323 aa)
	A0A0R0GMZ8	Uncharacterized protein. (352 aa)
	A0A0R0H2I0	Uncharacterized protein. (323 aa)
	A0A0R0HS35	Protein phosphatase; Belongs to the PP2C family. (222 aa)
	A0A0R0HUI5	Uncharacterized protein. (363 aa)
	A0A0R0I3Y4	SET domain-containing protein. (499 aa)
	A0A0R0KGF0	Uncharacterized protein. (210 aa)
	A0A0R0LDY9	Uncharacterized protein. (300 aa)
	A0A368UMI2	Peptidase_S24 domain-containing protein. (316 aa)
	C6SXM5_SOYBN	Uncharacterized protein. (159 aa)
	C6T175_SOYBN	Uncharacterized protein. (214 aa)
	C6T5N9_SOYBN	Uncharacterized protein. (162 aa)
	I1JD64_SOYBN	Uncharacterized protein. (280 aa)
	I1JFA7_SOYBN	G domain-containing protein. (914 aa)
	I1JNT8_SOYBN	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (564 aa)
	I1JQI6_SOYBN	RF_PROK_I domain-containing protein. (429 aa)
	I1JTG1_SOYBN	Peptidase_S26 domain-containing protein. (362 aa)
	I1JWJ8_SOYBN	Uncharacterized protein. (355 aa)
	I1JWN7_SOYBN	Uncharacterized protein. (196 aa)
	I1K5V4_SOYBN	Peptidase_S26 domain-containing protein. (291 aa)
	I1K648_SOYBN	ABC transporter domain-containing protein. (289 aa)
	I1KAU5_SOYBN	Uncharacterized protein. (162 aa)
	I1KF75_SOYBN	Uncharacterized protein. (291 aa)
	I1KIQ7_SOYBN	Uncharacterized protein. (464 aa)
	I1KPR0_SOYBN	ABC transporter domain-containing protein. (289 aa)
	I1KQ16_SOYBN	Peptidase_S26 domain-containing protein. (293 aa)
	I1L4I4_SOYBN	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (543 aa)
	I1L4I5_SOYBN	Uncharacterized protein. (464 aa)
	I1L5I2_SOYBN	CP-type G domain-containing protein. (554 aa)
	I1L837_SOYBN	G domain-containing protein. (915 aa)
	I1L8I1_SOYBN	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (467 aa)
	I1L9A2_SOYBN	Uncharacterized protein. (607 aa)
	I1LH06_SOYBN	Uncharacterized protein. (456 aa)
	I1LJL7_SOYBN	Uncharacterized protein. (322 aa)
	I1LK36_SOYBN	Uncharacterized protein. (450 aa)
	I1LNE2_SOYBN	Uncharacterized protein. (543 aa)
	I1LP11_SOYBN	CP-type G domain-containing protein. (557 aa)
	I1LQR5_SOYBN	Uncharacterized protein. (450 aa)
	I1LRW8_SOYBN	Uncharacterized protein. (291 aa)
	I1LUC3_SOYBN	Uncharacterized protein. (297 aa)
	I1LV19_SOYBN	Uncharacterized protein. (424 aa)
	I1LYQ3_SOYBN	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (467 aa)
	I1LZH4_SOYBN	Uncharacterized protein. (603 aa)
	I1M367_SOYBN	Uncharacterized protein. (421 aa)
	I1M3X9_SOYBN	Uncharacterized protein. (297 aa)
	I1M9R6_SOYBN	Protein kinase domain-containing protein. (668 aa)
	I1MGT8_SOYBN	SET domain-containing protein. (483 aa)
	I1MNV5_SOYBN	Uncharacterized protein. (291 aa)
	I1MWJ7_SOYBN	Protein kinase domain-containing protein. (671 aa)
	I1MYL3_SOYBN	Uncharacterized protein. (534 aa)
	I1N081_SOYBN	Uncharacterized protein. (159 aa)
	I1N404_SOYBN	Uncharacterized protein. (322 aa)
	I1NB26_SOYBN	RF_PROK_I domain-containing protein. (428 aa)
	K7KDF4_SOYBN	Uncharacterized protein. (197 aa)
	K7L0G9_SOYBN	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (535 aa)
	K7LDF3_SOYBN	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (115 aa)
	K7LIG6_SOYBN	Uncharacterized protein. (164 aa)
	K7LVN0_SOYBN	Magnesium transporter; Magnesium transporter that may mediate the influx of magnesium; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family. (457 aa)
	K7M6J8_SOYBN	Uncharacterized protein. (152 aa)
	K7MK03_SOYBN	Magnesium transporter; Magnesium transporter that may mediate the influx of magnesium; Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35.5) family. (456 aa)
	K7MSD5_SOYBN	Uncharacterized protein. (193 aa)
	K7MWV4_SOYBN	Uncharacterized protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (228 aa)
	K7N101_SOYBN	G domain-containing protein. (184 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0EYD4	I1LK36_SOYBN	A0A0R0EYD4	I1LK36	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein.	0.405
A0A0R0EYD4	I1LQR5_SOYBN	A0A0R0EYD4	I1LQR5	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.	Uncharacterized protein.	0.405
A0A0R0GMZ8	I1LK36_SOYBN	A0A0R0GMZ8	I1LK36	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A0R0GMZ8	I1LQR5_SOYBN	A0A0R0GMZ8	I1LQR5	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A0R0H2I0	I1KF75_SOYBN	A0A0R0H2I0	I1KF75	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0R0H2I0	I1LK36_SOYBN	A0A0R0H2I0	I1LK36	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A0R0H2I0	I1LQR5_SOYBN	A0A0R0H2I0	I1LQR5	Uncharacterized protein.	Uncharacterized protein.	0.478
A0A0R0H2I0	I1LRW8_SOYBN	A0A0R0H2I0	I1LRW8	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0R0H2I0	I1LUC3_SOYBN	A0A0R0H2I0	I1LUC3	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0R0H2I0	I1M3X9_SOYBN	A0A0R0H2I0	I1M3X9	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0R0HUI5	I1LK36_SOYBN	A0A0R0HUI5	I1LK36	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A0R0HUI5	I1LQR5_SOYBN	A0A0R0HUI5	I1LQR5	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A0R0I3Y4	C6T5N9_SOYBN	A0A0R0I3Y4	C6T5N9	SET domain-containing protein.	Uncharacterized protein.	0.681
A0A0R0I3Y4	I1KAU5_SOYBN	A0A0R0I3Y4	I1KAU5	SET domain-containing protein.	Uncharacterized protein.	0.681
A0A0R0I3Y4	I1MGT8_SOYBN	A0A0R0I3Y4	I1MGT8	SET domain-containing protein.	SET domain-containing protein.	0.543
A0A0R0KGF0	I1K648_SOYBN	A0A0R0KGF0	I1K648	Uncharacterized protein.	ABC transporter domain-containing protein.	0.737
A0A0R0KGF0	I1KPR0_SOYBN	A0A0R0KGF0	I1KPR0	Uncharacterized protein.	ABC transporter domain-containing protein.	0.738
A0A0R0LDY9	I1K648_SOYBN	A0A0R0LDY9	I1K648	Uncharacterized protein.	ABC transporter domain-containing protein.	0.708
A0A0R0LDY9	I1KPR0_SOYBN	A0A0R0LDY9	I1KPR0	Uncharacterized protein.	ABC transporter domain-containing protein.	0.709
C6T5N9_SOYBN	A0A0R0I3Y4	C6T5N9	A0A0R0I3Y4	Uncharacterized protein.	SET domain-containing protein.	0.681