(70 nodes) Maintenance of root meristem identity network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1N4Y4_SOYBN	Protein kinase domain-containing protein. (408 aa)
	A0A0R0K8A6	Uncharacterized protein. (305 aa)
	A0A0R0K118	Uncharacterized protein. (79 aa)
	A0A0R0JL21	Uncharacterized protein. (112 aa)
	A0A0R0ID91	LRRNT_2 domain-containing protein. (717 aa)
	A0A0R0HS93	Uncharacterized protein; Belongs to the peptidase C19 family. (1141 aa)
	A0A0R0HQE4	Uncharacterized protein. (179 aa)
	A0A0R0GSM7	USP domain-containing protein. (677 aa)
	A0A0R0GRJ6	Uncharacterized protein; Belongs to the peptidase C19 family. (443 aa)
	A0A0R0GKM7	Uncharacterized protein; Belongs to the peptidase C19 family. (1118 aa)
	A0A0R0GJF5	Uncharacterized protein. (224 aa)
	A0A0R0FEH7	Uncharacterized protein. (106 aa)
	A0A0R0F930	MATH domain-containing protein. (111 aa)
	A0A0R0EW71	Uncharacterized protein. (460 aa)
	A0A0R0EGZ2	USP domain-containing protein. (749 aa)
	A0A0R0E8U1	Protein kinase domain-containing protein. (261 aa)
	A0A0R0E8L8	MATH domain-containing protein. (212 aa)
	K7MZE3_SOYBN	MATH domain-containing protein. (379 aa)
	K7MZE2_SOYBN	MATH domain-containing protein. (348 aa)
	K7MZE1_SOYBN	MATH domain-containing protein. (410 aa)
	K7MUG0_SOYBN	LRRNT_2 domain-containing protein. (666 aa)
	K7MGD2_SOYBN	Uncharacterized protein. (349 aa)
	K7MFQ3_SOYBN	Uncharacterized protein. (349 aa)
	K7M481_SOYBN	OBERON-like protein; Probable transcription factor. (567 aa)
	K7LTX1_SOYBN	BHLH domain-containing protein. (957 aa)
	K7LLB3_SOYBN	Uncharacterized protein. (1072 aa)
	K7LJ01_SOYBN	UCH domain-containing protein. (146 aa)
	K7LJ00_SOYBN	USP domain-containing protein. (70 aa)
	K7LI65_SOYBN	MATH domain-containing protein. (366 aa)
	K7LF76_SOYBN	Uncharacterized protein. (353 aa)
	K7KG70_SOYBN	MATH domain-containing protein. (377 aa)
	K7KES0_SOYBN	Uncharacterized protein. (500 aa)
	K7K7W0_SOYBN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1139 aa)
	K7K7L3_SOYBN	Uncharacterized protein. (108 aa)
	K7K3Y4_SOYBN	Uncharacterized protein. (348 aa)
	K7K265_SOYBN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1112 aa)
	K7K1U6_SOYBN	Uncharacterized protein. (108 aa)
	I1NGB6_SOYBN	Uncharacterized protein. (1073 aa)
	I1NE78_SOYBN	OBERON-like protein; Probable transcription factor. (567 aa)
	I1NE39_SOYBN	Uncharacterized protein; Belongs to the peptidase C19 family. (378 aa)
	I1N9T1_SOYBN	Uncharacterized protein. (675 aa)
	I1N2D6_SOYBN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1148 aa)
	GMRLK3	Protein kinase domain-containing protein. (987 aa)
	I1MU06_SOYBN	Uncharacterized protein. (248 aa)
	I1MTT7_SOYBN	Uncharacterized protein. (94 aa)
	I1MSN5_SOYBN	Uncharacterized protein. (290 aa)
	I1MHY6_SOYBN	Uncharacterized protein. (239 aa)
	GMRLK2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (986 aa)
	I1LZV9_SOYBN	B box-type domain-containing protein. (247 aa)
	I1LXW2_SOYBN	OBERON-like protein; Probable transcription factor. (567 aa)
	I1LL85_SOYBN	Uncharacterized protein. (538 aa)
	I1LFS4_SOYBN	Uncharacterized protein. (1063 aa)
	I1L4K3_SOYBN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (449 aa)
	I1L298_SOYBN	Uncharacterized protein. (239 aa)
	I1KZD2_SOYBN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1153 aa)
	I1KXV5_SOYBN	Protein kinase domain-containing protein. (994 aa)
	I1KWR5_SOYBN	Protein kinase domain-containing protein. (408 aa)
	I1KQ06_SOYBN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (409 aa)
	I1KIN9_SOYBN	Protein kinase domain-containing protein. (465 aa)
	I1KCT4_SOYBN	Uncharacterized protein. (96 aa)
	I1K5W1_SOYBN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (411 aa)
	I1JWU9_SOYBN	Uncharacterized protein. (95 aa)
	I1JJQ5_SOYBN	OBERON-like protein; Probable transcription factor. (567 aa)
	I1JIM7_SOYBN	Uncharacterized protein; Belongs to the peptidase C19 family. (1118 aa)
	I1JFX1_SOYBN	MATH domain-containing protein. (360 aa)
	C6TI19_SOYBN	Uncharacterized protein. (290 aa)
	A0A368UG72	Uncharacterized protein; Belongs to the peptidase C19 family. (965 aa)
	A0A0R0LAR8	BRX domain-containing protein. (85 aa)
	A0A0R0L7Q8	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (999 aa)
	A0A0R0KQH6	Uncharacterized protein. (678 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0E8U1	I1K5W1_SOYBN	A0A0R0E8U1	I1K5W1	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.540
A0A0R0E8U1	I1KIN9_SOYBN	A0A0R0E8U1	I1KIN9	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.540
A0A0R0E8U1	I1KQ06_SOYBN	A0A0R0E8U1	I1KQ06	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.540
A0A0R0E8U1	I1L4K3_SOYBN	A0A0R0E8U1	I1L4K3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.540
A0A0R0ID91	I1KWR5_SOYBN	A0A0R0ID91	I1KWR5	LRRNT_2 domain-containing protein.	Protein kinase domain-containing protein.	0.773
A0A0R0ID91	I1N4Y4_SOYBN	A0A0R0ID91	I1N4Y4	LRRNT_2 domain-containing protein.	Protein kinase domain-containing protein.	0.773
A0A0R0KQH6	I1N9T1_SOYBN	A0A0R0KQH6	I1N9T1	Uncharacterized protein.	Uncharacterized protein.	0.543
I1K5W1_SOYBN	A0A0R0E8U1	I1K5W1	A0A0R0E8U1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.540
I1K5W1_SOYBN	I1KIN9_SOYBN	I1K5W1	I1KIN9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.547
I1K5W1_SOYBN	I1KQ06_SOYBN	I1K5W1	I1KQ06	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.543
I1K5W1_SOYBN	I1L4K3_SOYBN	I1K5W1	I1L4K3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.548
I1KIN9_SOYBN	A0A0R0E8U1	I1KIN9	A0A0R0E8U1	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.540
I1KIN9_SOYBN	I1K5W1_SOYBN	I1KIN9	I1K5W1	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.547
I1KIN9_SOYBN	I1KQ06_SOYBN	I1KIN9	I1KQ06	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.547
I1KIN9_SOYBN	I1L4K3_SOYBN	I1KIN9	I1L4K3	Protein kinase domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.543
I1KQ06_SOYBN	A0A0R0E8U1	I1KQ06	A0A0R0E8U1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.540
I1KQ06_SOYBN	I1K5W1_SOYBN	I1KQ06	I1K5W1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.543
I1KQ06_SOYBN	I1KIN9_SOYBN	I1KQ06	I1KIN9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.547
I1KQ06_SOYBN	I1L4K3_SOYBN	I1KQ06	I1L4K3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.548
I1KWR5_SOYBN	A0A0R0ID91	I1KWR5	A0A0R0ID91	Protein kinase domain-containing protein.	LRRNT_2 domain-containing protein.	0.773