46 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K7LLK0_SOYBN	Uncharacterized protein. (801 aa)
	A0A0R0GAU8	Uncharacterized protein. (373 aa)
	A0A0R0GC27	Uncharacterized protein. (751 aa)
	A0A0R0GVT5	Uncharacterized protein. (682 aa)
	A0A0R0HN81	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (207 aa)
	A0A0R0I4J2	Protein kinase domain-containing protein. (997 aa)
	A0A0R0JF54	Uncharacterized protein. (971 aa)
	A0A0R0K0N4	Uncharacterized protein. (236 aa)
	I1JFF6_SOYBN	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (206 aa)
	I1JPU2_SOYBN	Uncharacterized protein. (670 aa)
	I1JZT9_SOYBN	Uncharacterized protein. (538 aa)
	I1KL28_SOYBN	LAGLIDADG_2 domain-containing protein. (763 aa)
	I1KMB5_SOYBN	Uncharacterized protein. (384 aa)
	I1KSK4_SOYBN	Uncharacterized protein. (1079 aa)
	I1KZW4_SOYBN	Uncharacterized protein. (806 aa)
	I1KZX8_SOYBN	Uncharacterized protein. (420 aa)
	I1L1F6_SOYBN	Uncharacterized protein. (355 aa)
	I1LU04_SOYBN	J domain-containing protein. (250 aa)
	I1LUI7_SOYBN	Nuclear cap-binding protein subunit 2. (253 aa)
	I1M3Q3_SOYBN	Nuclear cap-binding protein subunit 2. (255 aa)
	I1M488_SOYBN	J domain-containing protein. (250 aa)
	I1M6P0_SOYBN	Uncharacterized protein. (888 aa)
	I1M7C6_SOYBN	Uncharacterized protein. (221 aa)
	I1MFM1_SOYBN	Uncharacterized protein. (417 aa)
	I1MH53_SOYBN	Uncharacterized protein. (363 aa)
	I1MSJ8_SOYBN	Uncharacterized protein. (360 aa)
	I1MTN7_SOYBN	Uncharacterized protein. (538 aa)
	I1MV08_SOYBN	Uncharacterized protein. (228 aa)
	I1MXF9_SOYBN	Uncharacterized protein. (1008 aa)
	I1NAG1_SOYBN	Uncharacterized protein. (673 aa)
	I1NDG9_SOYBN	Uncharacterized protein. (392 aa)
	I1NFH2_SOYBN	Protein kinase domain-containing protein. (989 aa)
	I1NFU9_SOYBN	Uncharacterized protein. (798 aa)
	K7K2M8_SOYBN	Protein kinase domain-containing protein. (858 aa)
	K7KBH1_SOYBN	Uncharacterized protein. (908 aa)
	K7KFI9_SOYBN	Uncharacterized protein. (828 aa)
	K7KKF9_SOYBN	C3H1-type domain-containing protein. (1641 aa)
	K7KN39_SOYBN	Uncharacterized protein. (228 aa)
	K7KW79_SOYBN	C3H1-type domain-containing protein. (1629 aa)
	K7L895_SOYBN	Uncharacterized protein. (882 aa)
	K7LFM5_SOYBN	Uncharacterized protein. (221 aa)
	K7LLE8_SOYBN	Uncharacterized protein. (1017 aa)
	GLYMA_U029000	Uncharacterized protein. (1002 aa)
	K7MYR3_SOYBN	Uncharacterized protein. (828 aa)
	K7N0N6_SOYBN	LAGLIDADG_2 domain-containing protein. (737 aa)
	K7N3A9_SOYBN	Uncharacterized protein. (1020 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0GAU8	A0A0R0GC27	A0A0R0GAU8	A0A0R0GC27	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A0R0GAU8	A0A0R0HN81	A0A0R0GAU8	A0A0R0HN81	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.757
A0A0R0GAU8	A0A0R0I4J2	A0A0R0GAU8	A0A0R0I4J2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.783
A0A0R0GAU8	A0A0R0JF54	A0A0R0GAU8	A0A0R0JF54	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A0R0GAU8	GLYMA_U029000	A0A0R0GAU8	K7M5R6	Uncharacterized protein.	Uncharacterized protein.	0.755
A0A0R0GAU8	I1JFF6_SOYBN	A0A0R0GAU8	I1JFF6	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.757
A0A0R0GAU8	I1KSK4_SOYBN	A0A0R0GAU8	I1KSK4	Uncharacterized protein.	Uncharacterized protein.	0.770
A0A0R0GAU8	I1KZW4_SOYBN	A0A0R0GAU8	I1KZW4	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A0R0GAU8	I1KZX8_SOYBN	A0A0R0GAU8	I1KZX8	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A0R0GAU8	I1LUI7_SOYBN	A0A0R0GAU8	I1LUI7	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.658
A0A0R0GAU8	I1M3Q3_SOYBN	A0A0R0GAU8	I1M3Q3	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.658
A0A0R0GAU8	I1MFM1_SOYBN	A0A0R0GAU8	I1MFM1	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A0R0GAU8	I1MXF9_SOYBN	A0A0R0GAU8	I1MXF9	Uncharacterized protein.	Uncharacterized protein.	0.755
A0A0R0GAU8	I1NFH2_SOYBN	A0A0R0GAU8	I1NFH2	Uncharacterized protein.	Protein kinase domain-containing protein.	0.783
A0A0R0GAU8	I1NFU9_SOYBN	A0A0R0GAU8	I1NFU9	Uncharacterized protein.	Uncharacterized protein.	0.711
A0A0R0GAU8	K7K2M8_SOYBN	A0A0R0GAU8	K7K2M8	Uncharacterized protein.	Protein kinase domain-containing protein.	0.783
A0A0R0GAU8	K7KFI9_SOYBN	A0A0R0GAU8	K7KFI9	Uncharacterized protein.	Uncharacterized protein.	0.770
A0A0R0GAU8	K7KKF9_SOYBN	A0A0R0GAU8	K7KKF9	Uncharacterized protein.	C3H1-type domain-containing protein.	0.711
A0A0R0GAU8	K7KW79_SOYBN	A0A0R0GAU8	K7KW79	Uncharacterized protein.	C3H1-type domain-containing protein.	0.711
A0A0R0GAU8	K7L895_SOYBN	A0A0R0GAU8	K7L895	Uncharacterized protein.	Uncharacterized protein.	0.900