45 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0GC27	Uncharacterized protein. (751 aa)
	A0A0R0HN81	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (207 aa)
	A0A0R0KQF5	RRM domain-containing protein. (298 aa)
	A0A0R0KZ95	Uncharacterized protein. (195 aa)
	A0A368UH41	TOG domain-containing protein. (1061 aa)
	A0A368UHE3	TOG domain-containing protein. (1152 aa)
	C6SVH9_SOYBN	Small nuclear ribonucleoprotein G. (79 aa)
	C6T1E6_SOYBN	Small nuclear ribonucleoprotein G. (79 aa)
	C6T9S5_SOYBN	Uncharacterized protein. (414 aa)
	I1J8V4_SOYBN	RRM domain-containing protein. (481 aa)
	I1JFF6_SOYBN	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (206 aa)
	I1JJ67_SOYBN	Small nuclear ribonucleoprotein-associated protein. (282 aa)
	I1JX53_SOYBN	DUF3700 domain-containing protein. (192 aa)
	I1JZD4_SOYBN	Uncharacterized protein. (600 aa)
	I1KSK4_SOYBN	Uncharacterized protein. (1079 aa)
	I1KZW4_SOYBN	Uncharacterized protein. (806 aa)
	I1KZX8_SOYBN	Uncharacterized protein. (420 aa)
	I1L5H8_SOYBN	Uncharacterized protein. (342 aa)
	I1L690_SOYBN	Uncharacterized protein. (414 aa)
	I1LAN4_SOYBN	DUF3700 domain-containing protein. (161 aa)
	I1LDZ4_SOYBN	DUF3700 domain-containing protein. (250 aa)
	I1LHR1_SOYBN	RRM domain-containing protein. (482 aa)
	I1LP18_SOYBN	Uncharacterized protein. (346 aa)
	I1LT24_SOYBN	DUF3700 domain-containing protein. (254 aa)
	I1M0C1_SOYBN	DUF3700 domain-containing protein. (257 aa)
	I1M3B1_SOYBN	DUF3700 domain-containing protein. (254 aa)
	I1M5W5_SOYBN	Matrin-type domain-containing protein. (350 aa)
	I1M6U9_SOYBN	Small nuclear ribonucleoprotein-associated protein. (281 aa)
	I1MCD5_SOYBN	Matrin-type domain-containing protein. (349 aa)
	I1MEE7_SOYBN	DUF3700 domain-containing protein. (251 aa)
	I1MFM1_SOYBN	Uncharacterized protein. (417 aa)
	I1MXF9_SOYBN	Uncharacterized protein. (1008 aa)
	I1NFU9_SOYBN	Uncharacterized protein. (798 aa)
	K7KFI9_SOYBN	Uncharacterized protein. (828 aa)
	K7KKF9_SOYBN	C3H1-type domain-containing protein. (1641 aa)
	K7KW79_SOYBN	C3H1-type domain-containing protein. (1629 aa)
	K7KYQ4_SOYBN	Uncharacterized protein. (605 aa)
	K7L2P5_SOYBN	DUF3700 domain-containing protein. (314 aa)
	K7LGQ7_SOYBN	Uncharacterized protein. (985 aa)
	K7LLE8_SOYBN	Uncharacterized protein. (1017 aa)
	K7LLK0_SOYBN	Uncharacterized protein. (801 aa)
	GLYMA_U029000	Uncharacterized protein. (1002 aa)
	K7MYR3_SOYBN	Uncharacterized protein. (828 aa)
	K7N187_SOYBN	DUF3700 domain-containing protein. (194 aa)
	K7N3A9_SOYBN	Uncharacterized protein. (1020 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0GC27	A0A0R0HN81	A0A0R0GC27	A0A0R0HN81	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.770
A0A0R0GC27	A0A0R0KQF5	A0A0R0GC27	A0A0R0KQF5	Uncharacterized protein.	RRM domain-containing protein.	0.641
A0A0R0GC27	A0A368UH41	A0A0R0GC27	A0A368UH41	Uncharacterized protein.	TOG domain-containing protein.	0.968
A0A0R0GC27	A0A368UHE3	A0A0R0GC27	A0A368UHE3	Uncharacterized protein.	TOG domain-containing protein.	0.968
A0A0R0GC27	C6SVH9_SOYBN	A0A0R0GC27	C6SVH9	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.930
A0A0R0GC27	C6T1E6_SOYBN	A0A0R0GC27	C6T1E6	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.930
A0A0R0GC27	C6T9S5_SOYBN	A0A0R0GC27	C6T9S5	Uncharacterized protein.	Uncharacterized protein.	0.691
A0A0R0GC27	GLYMA_U029000	A0A0R0GC27	K7M5R6	Uncharacterized protein.	Uncharacterized protein.	0.727
A0A0R0GC27	I1J8V4_SOYBN	A0A0R0GC27	I1J8V4	Uncharacterized protein.	RRM domain-containing protein.	0.689
A0A0R0GC27	I1JFF6_SOYBN	A0A0R0GC27	I1JFF6	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.770
A0A0R0GC27	I1JJ67_SOYBN	A0A0R0GC27	I1JJ67	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.943
A0A0R0GC27	I1JZD4_SOYBN	A0A0R0GC27	I1JZD4	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A0R0GC27	I1KSK4_SOYBN	A0A0R0GC27	I1KSK4	Uncharacterized protein.	Uncharacterized protein.	0.714
A0A0R0GC27	I1KZW4_SOYBN	A0A0R0GC27	I1KZW4	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A0R0GC27	I1L5H8_SOYBN	A0A0R0GC27	I1L5H8	Uncharacterized protein.	Uncharacterized protein.	0.691
A0A0R0GC27	I1L690_SOYBN	A0A0R0GC27	I1L690	Uncharacterized protein.	Uncharacterized protein.	0.691
A0A0R0GC27	I1LHR1_SOYBN	A0A0R0GC27	I1LHR1	Uncharacterized protein.	RRM domain-containing protein.	0.689
A0A0R0GC27	I1LP18_SOYBN	A0A0R0GC27	I1LP18	Uncharacterized protein.	Uncharacterized protein.	0.691
A0A0R0GC27	I1M5W5_SOYBN	A0A0R0GC27	I1M5W5	Uncharacterized protein.	Matrin-type domain-containing protein.	0.994
A0A0R0GC27	I1M6U9_SOYBN	A0A0R0GC27	I1M6U9	Uncharacterized protein.	Small nuclear ribonucleoprotein-associated protein.	0.943