STRINGSTRING
K7LGQ7_SOYBN K7LGQ7_SOYBN A0A0R0HN81 A0A0R0HN81 A0A0R0JWG5 A0A0R0JWG5 A0A0R0JWK1 A0A0R0JWK1 A0A0R0KQF5 A0A0R0KQF5 C6SWW8_SOYBN C6SWW8_SOYBN C6THW8_SOYBN C6THW8_SOYBN C6TN35_SOYBN C6TN35_SOYBN I1JDT3_SOYBN I1JDT3_SOYBN I1JFF6_SOYBN I1JFF6_SOYBN I1JJ31_SOYBN I1JJ31_SOYBN I1JX53_SOYBN I1JX53_SOYBN I1JZD4_SOYBN I1JZD4_SOYBN I1KSK4_SOYBN I1KSK4_SOYBN I1KSL0_SOYBN I1KSL0_SOYBN I1KY13_SOYBN I1KY13_SOYBN I1LAN4_SOYBN I1LAN4_SOYBN I1LDZ4_SOYBN I1LDZ4_SOYBN I1LT24_SOYBN I1LT24_SOYBN I1LT91_SOYBN I1LT91_SOYBN I1M0C1_SOYBN I1M0C1_SOYBN I1M3B1_SOYBN I1M3B1_SOYBN I1MEE7_SOYBN I1MEE7_SOYBN I1MJS7_SOYBN I1MJS7_SOYBN I1N0X2_SOYBN I1N0X2_SOYBN I1N9G0_SOYBN I1N9G0_SOYBN K7KFI9_SOYBN K7KFI9_SOYBN K7KYQ4_SOYBN K7KYQ4_SOYBN K7L2P5_SOYBN K7L2P5_SOYBN K7LCN6_SOYBN K7LCN6_SOYBN K7M4M3_SOYBN K7M4M3_SOYBN K7MCJ5_SOYBN K7MCJ5_SOYBN K7MYR3_SOYBN K7MYR3_SOYBN K7N187_SOYBN K7N187_SOYBN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
K7LGQ7_SOYBNUncharacterized protein. (985 aa)
A0A0R0HN81U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (207 aa)
A0A0R0JWG5X8 domain-containing protein. (247 aa)
A0A0R0JWK1X8 domain-containing protein. (251 aa)
A0A0R0KQF5RRM domain-containing protein. (298 aa)
C6SWW8_SOYBNSmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (131 aa)
C6THW8_SOYBNDUF3700 domain-containing protein. (254 aa)
C6TN35_SOYBNSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (115 aa)
I1JDT3_SOYBNSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (116 aa)
I1JFF6_SOYBNU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (206 aa)
I1JJ31_SOYBNX8 domain-containing protein. (258 aa)
I1JX53_SOYBNDUF3700 domain-containing protein. (192 aa)
I1JZD4_SOYBNUncharacterized protein. (600 aa)
I1KSK4_SOYBNUncharacterized protein. (1079 aa)
I1KSL0_SOYBNX8 domain-containing protein. (276 aa)
I1KY13_SOYBNX8 domain-containing protein. (256 aa)
I1LAN4_SOYBNDUF3700 domain-containing protein. (161 aa)
I1LDZ4_SOYBNDUF3700 domain-containing protein. (250 aa)
I1LT24_SOYBNDUF3700 domain-containing protein. (254 aa)
I1LT91_SOYBNRRM domain-containing protein. (837 aa)
I1M0C1_SOYBNDUF3700 domain-containing protein. (257 aa)
I1M3B1_SOYBNDUF3700 domain-containing protein. (254 aa)
I1MEE7_SOYBNDUF3700 domain-containing protein. (251 aa)
I1MJS7_SOYBNRRM domain-containing protein. (847 aa)
I1N0X2_SOYBNX8 domain-containing protein. (256 aa)
I1N9G0_SOYBNSmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
K7KFI9_SOYBNUncharacterized protein. (828 aa)
K7KYQ4_SOYBNUncharacterized protein. (605 aa)
K7L2P5_SOYBNDUF3700 domain-containing protein. (314 aa)
K7LCN6_SOYBNX8 domain-containing protein. (326 aa)
K7M4M3_SOYBNX8 domain-containing protein. (257 aa)
K7MCJ5_SOYBNX8 domain-containing protein. (324 aa)
K7MYR3_SOYBNUncharacterized protein. (828 aa)
K7N187_SOYBNDUF3700 domain-containing protein. (194 aa)
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.