(93 nodes) SCF ubiquitin ligase complex network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1MAY4_SOYBN	Uncharacterized protein. (640 aa)
	A0A0R0E851	F-box domain-containing protein. (371 aa)
	A0A0R0EYF5	Uncharacterized protein. (526 aa)
	A0A0R0EYU7	Uncharacterized protein. (375 aa)
	A0A0R0FAK2	Uncharacterized protein. (123 aa)
	A0A0R0FC80	Uncharacterized protein; Belongs to the SKP1 family. (347 aa)
	A0A0R0G2Z8	FBA_1 domain-containing protein. (359 aa)
	A0A0R0HGK0	Uncharacterized protein; Belongs to the SKP1 family. (265 aa)
	A0A0R0HM17	Uncharacterized protein; Belongs to the SKP1 family. (155 aa)
	A0A0R0IBT3	Skp1 domain-containing protein; Belongs to the SKP1 family. (360 aa)
	A0A0R0IES1	Uncharacterized protein. (179 aa)
	A0A0R0IV90	Uncharacterized protein. (484 aa)
	A0A0R0J2P0	Uncharacterized protein. (628 aa)
	A0A0R0JBR7	F-box domain-containing protein. (349 aa)
	A0A0R0JXQ8	Uncharacterized protein. (81 aa)
	A0A0R0KWD6	F-box domain-containing protein. (383 aa)
	A0A0R0LC97	Uncharacterized protein; Belongs to the SKP1 family. (155 aa)
	ZTL2	Clock-associated PAS protein ZEITLUPE 2. (617 aa)
	C6SZH2_SOYBN	Uncharacterized protein; Belongs to the SKP1 family. (155 aa)
	C6T2R2_SOYBN	RING-type domain-containing protein. (118 aa)
	C6T4T3_SOYBN	F-box domain-containing protein. (183 aa)
	C6T901_SOYBN	Uncharacterized protein. (443 aa)
	C6TH23_SOYBN	Uncharacterized protein; Belongs to the SKP1 family. (155 aa)
	C6TNU0_SOYBN	F-box domain-containing protein. (95 aa)
	I1J7K5_SOYBN	Uncharacterized protein. (671 aa)
	I1JCY8_SOYBN	Uncharacterized protein. (573 aa)
	GMTIR1A	F-box domain-containing protein. (585 aa)
	I1JGR1_SOYBN	F-box domain-containing protein. (306 aa)
	I1JGX7_SOYBN	Uncharacterized protein. (630 aa)
	I1JL30_SOYBN	Uncharacterized protein. (708 aa)
	I1JNT1_SOYBN	Uncharacterized protein. (373 aa)
	I1JNV4_SOYBN	Uncharacterized protein. (527 aa)
	I1JQ53_SOYBN	Uncharacterized protein. (335 aa)
	GMTIR1D	F-box domain-containing protein. (586 aa)
	I1JST5_SOYBN	F-box domain-containing protein. (579 aa)
	I1JV53_SOYBN	Uncharacterized protein. (583 aa)
	I1JYY9_SOYBN	F-box domain-containing protein. (321 aa)
	I1K7B5_SOYBN	F-box domain-containing protein. (582 aa)
	I1K830_SOYBN	Sleepy. (174 aa)
	I1K9P6_SOYBN	Uncharacterized protein. (587 aa)
	I1KAH6_SOYBN	F-box domain-containing protein. (372 aa)
	I1KFB5_SOYBN	RING-type domain-containing protein. (116 aa)
	I1KHZ7_SOYBN	Uncharacterized protein. (388 aa)
	I1KLC7_SOYBN	Uncharacterized protein. (578 aa)
	I1KQQ6_SOYBN	Uncharacterized protein. (579 aa)
	I1L6J4_SOYBN	Uncharacterized protein; Belongs to the SKP1 family. (346 aa)
	I1L829_SOYBN	F-box domain-containing protein. (373 aa)
	I1L9G2_SOYBN	Uncharacterized protein. (330 aa)
	I1LJN6_SOYBN	ApaG domain-containing protein. (443 aa)
	I1LKP0_SOYBN	F-box domain-containing protein. (341 aa)
	I1LTX8_SOYBN	Uncharacterized protein. (331 aa)
	I1LU61_SOYBN	RING-type domain-containing protein. (118 aa)
	I1LXB5_SOYBN	F-box domain-containing protein. (375 aa)
	I1LZU6_SOYBN	Uncharacterized protein. (578 aa)
	I1M4A9_SOYBN	Uncharacterized protein. (326 aa)
	I1M5W1_SOYBN	Uncharacterized protein. (565 aa)
	I1M8R5_SOYBN	F-box domain-containing protein. (144 aa)
	I1MAC7_SOYBN	F-box domain-containing protein. (371 aa)
	GMAFB3B	Uncharacterized protein. (572 aa)
	I1MNN2_SOYBN	Uncharacterized protein. (573 aa)
	I1MQ75_SOYBN	F-box domain-containing protein. (364 aa)
	ZTL1	Uncharacterized protein. (617 aa)
	I1MXK1_SOYBN	F-box domain-containing protein. (174 aa)
	GMAFB3A	Uncharacterized protein. (572 aa)
	I1NAR1_SOYBN	Uncharacterized protein. (335 aa)
	GMTIR1C	Uncharacterized protein. (587 aa)
	I1NF48_SOYBN	Uncharacterized protein. (418 aa)
	K7K2G8_SOYBN	Uncharacterized protein. (82 aa)
	K7K5F6_SOYBN	F-box domain-containing protein. (370 aa)
	K7KAA2_SOYBN	Uncharacterized protein. (538 aa)
	K7KC04_SOYBN	Uncharacterized protein; Belongs to the SKP1 family. (401 aa)
	K7KEG8_SOYBN	F-box domain-containing protein. (377 aa)
	K7KSI2_SOYBN	F-box domain-containing protein. (277 aa)
	K7KU58_SOYBN	Uncharacterized protein. (103 aa)
	K7KW05_SOYBN	F-box domain-containing protein. (356 aa)
	K7KW06_SOYBN	F-box domain-containing protein. (349 aa)
	K7KW07_SOYBN	F-box domain-containing protein. (374 aa)
	K7L054_SOYBN	Uncharacterized protein; Belongs to the SKP1 family. (366 aa)
	K7LD34_SOYBN	Uncharacterized protein. (134 aa)
	GMTIR1B	F-box domain-containing protein. (585 aa)
	K7LJ59_SOYBN	F-box domain-containing protein. (378 aa)
	K7LM04_SOYBN	Uncharacterized protein. (419 aa)
	K7M6L8_SOYBN	Uncharacterized protein. (248 aa)
	K7M6N0_SOYBN	Uncharacterized protein. (68 aa)
	K7M856_SOYBN	Uncharacterized protein. (652 aa)
	K7M8I2_SOYBN	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (110 aa)
	K7M8S3_SOYBN	Uncharacterized protein. (130 aa)
	K7ME10_SOYBN	Uncharacterized protein; Belongs to the SKP1 family. (183 aa)
	K7MI28_SOYBN	Uncharacterized protein; Belongs to the SKP1 family. (367 aa)
	K7MIQ3_SOYBN	F-box domain-containing protein. (372 aa)
	K7MIQ4_SOYBN	F-box domain-containing protein. (366 aa)
	K7ML06_SOYBN	Uncharacterized protein. (581 aa)
	K7MLZ2_SOYBN	FBA_1 domain-containing protein. (390 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0EYF5	A0A0R0FAK2	A0A0R0EYF5	A0A0R0FAK2	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A0R0EYF5	A0A0R0FC80	A0A0R0EYF5	A0A0R0FC80	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	A0A0R0HGK0	A0A0R0EYF5	A0A0R0HGK0	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	A0A0R0HM17	A0A0R0EYF5	A0A0R0HM17	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	A0A0R0IBT3	A0A0R0EYF5	A0A0R0IBT3	Uncharacterized protein.	Skp1 domain-containing protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	A0A0R0LC97	A0A0R0EYF5	A0A0R0LC97	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	C6SZH2_SOYBN	A0A0R0EYF5	C6SZH2	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	C6T2R2_SOYBN	A0A0R0EYF5	C6T2R2	Uncharacterized protein.	RING-type domain-containing protein.	0.497
A0A0R0EYF5	C6TH23_SOYBN	A0A0R0EYF5	C6TH23	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	I1KFB5_SOYBN	A0A0R0EYF5	I1KFB5	Uncharacterized protein.	RING-type domain-containing protein.	0.497
A0A0R0EYF5	I1L6J4_SOYBN	A0A0R0EYF5	I1L6J4	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	I1LU61_SOYBN	A0A0R0EYF5	I1LU61	Uncharacterized protein.	RING-type domain-containing protein.	0.497
A0A0R0EYF5	K7K2G8_SOYBN	A0A0R0EYF5	K7K2G8	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A0R0EYF5	K7KC04_SOYBN	A0A0R0EYF5	K7KC04	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	K7L054_SOYBN	A0A0R0EYF5	K7L054	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	K7M6N0_SOYBN	A0A0R0EYF5	K7M6N0	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A0R0EYF5	K7M8I2_SOYBN	A0A0R0EYF5	K7M8I2	Uncharacterized protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	K7ME10_SOYBN	A0A0R0EYF5	K7ME10	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0EYF5	K7MI28_SOYBN	A0A0R0EYF5	K7MI28	Uncharacterized protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.750
A0A0R0FAK2	A0A0R0EYF5	A0A0R0FAK2	A0A0R0EYF5	Uncharacterized protein.	Uncharacterized protein.	0.497