(31 nodes) Rough endoplasmic reticulum membrane network (Glycine max)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0R0EYD4	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (361 aa)
	A0A0R0L4Y4	SRP54 domain-containing protein. (308 aa)
	C6T1E8_SOYBN	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (82 aa)
	C6TBU3_SOYBN	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (476 aa)
	C6TEP1_SOYBN	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (62 aa)
	I1J575_SOYBN	Uncharacterized protein. (259 aa)
	I1J9W0_SOYBN	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (104 aa)
	I1JC42_SOYBN	Uncharacterized protein. (259 aa)
	I1JIA6_SOYBN	Uncharacterized protein. (69 aa)
	I1JNT8_SOYBN	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (564 aa)
	I1JXP5_SOYBN	Uncharacterized protein. (576 aa)
	I1KBY5_SOYBN	Uncharacterized protein. (576 aa)
	I1KDE5_SOYBN	SRP54 domain-containing protein. (623 aa)
	I1KDJ8_SOYBN	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (476 aa)
	I1KXD2_SOYBN	Uncharacterized protein. (256 aa)
	I1L1W0_SOYBN	J domain-containing protein. (685 aa)
	I1L2Q0_SOYBN	Uncharacterized protein. (70 aa)
	I1LGQ1_SOYBN	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (75 aa)
	I1LKD9_SOYBN	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (107 aa)
	I1LST6_SOYBN	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (476 aa)
	I1LTD1_SOYBN	Uncharacterized protein. (457 aa)
	I1LTE6_SOYBN	Uncharacterized protein. (69 aa)
	I1LTG9_SOYBN	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (105 aa)
	I1LV79_SOYBN	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (476 aa)
	I1MHK8_SOYBN	J domain-containing protein. (685 aa)
	I1MJW1_SOYBN	Uncharacterized protein. (462 aa)
	K7KW51_SOYBN	Uncharacterized protein. (2088 aa)
	K7LDF3_SOYBN	Uncharacterized protein; Belongs to the SecY/SEC61-alpha family. (115 aa)
	K7MKC7_SOYBN	SRP54 domain-containing protein. (626 aa)
	K7MUS8_SOYBN	Uncharacterized protein. (83 aa)
	K7MUV9_SOYBN	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (83 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0L4Y4	C6TBU3_SOYBN	A0A0R0L4Y4	C6TBU3	SRP54 domain-containing protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.827
A0A0R0L4Y4	I1J575_SOYBN	A0A0R0L4Y4	I1J575	SRP54 domain-containing protein.	Uncharacterized protein.	0.975
A0A0R0L4Y4	I1JC42_SOYBN	A0A0R0L4Y4	I1JC42	SRP54 domain-containing protein.	Uncharacterized protein.	0.975
A0A0R0L4Y4	I1JIA6_SOYBN	A0A0R0L4Y4	I1JIA6	SRP54 domain-containing protein.	Uncharacterized protein.	0.605
A0A0R0L4Y4	I1KDJ8_SOYBN	A0A0R0L4Y4	I1KDJ8	SRP54 domain-containing protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.827
A0A0R0L4Y4	I1KXD2_SOYBN	A0A0R0L4Y4	I1KXD2	SRP54 domain-containing protein.	Uncharacterized protein.	0.975
A0A0R0L4Y4	I1L1W0_SOYBN	A0A0R0L4Y4	I1L1W0	SRP54 domain-containing protein.	J domain-containing protein.	0.556
A0A0R0L4Y4	I1LST6_SOYBN	A0A0R0L4Y4	I1LST6	SRP54 domain-containing protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.827
A0A0R0L4Y4	I1LTE6_SOYBN	A0A0R0L4Y4	I1LTE6	SRP54 domain-containing protein.	Uncharacterized protein.	0.605
A0A0R0L4Y4	I1LV79_SOYBN	A0A0R0L4Y4	I1LV79	SRP54 domain-containing protein.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.827
A0A0R0L4Y4	I1MHK8_SOYBN	A0A0R0L4Y4	I1MHK8	SRP54 domain-containing protein.	J domain-containing protein.	0.556
C6T1E8_SOYBN	C6TBU3_SOYBN	C6T1E8	C6TBU3	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.917
C6T1E8_SOYBN	C6TEP1_SOYBN	C6T1E8	C6TEP1	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.715
C6T1E8_SOYBN	I1J9W0_SOYBN	C6T1E8	I1J9W0	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.715
C6T1E8_SOYBN	I1JIA6_SOYBN	C6T1E8	I1JIA6	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.987
C6T1E8_SOYBN	I1KDJ8_SOYBN	C6T1E8	I1KDJ8	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.917
C6T1E8_SOYBN	I1L1W0_SOYBN	C6T1E8	I1L1W0	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	J domain-containing protein.	0.894
C6T1E8_SOYBN	I1LGQ1_SOYBN	C6T1E8	I1LGQ1	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.715
C6T1E8_SOYBN	I1LST6_SOYBN	C6T1E8	I1LST6	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.917
C6T1E8_SOYBN	I1LTD1_SOYBN	C6T1E8	I1LTD1	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.	Uncharacterized protein.	0.648