21 items (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1MFQ5_SOYBN	Transcriptional adapter. (554 aa)
	K7KM59_SOYBN	Uncharacterized protein. (785 aa)
	K7KMT5_SOYBN	Uncharacterized protein. (878 aa)
	K7KUJ4_SOYBN	Uncharacterized protein. (785 aa)
	K7LB83_SOYBN	Transcriptional adapter. (554 aa)
	K7LT00_SOYBN	Uncharacterized protein. (1016 aa)
	K7M6Y5_SOYBN	Uncharacterized protein. (776 aa)
	K7M8N1_SOYBN	Uncharacterized protein. (1673 aa)
	K7MKM1_SOYBN	Uncharacterized protein. (812 aa)
	K7MV36_SOYBN	Uncharacterized protein. (5108 aa)
	A0A0R0E7P8	Uncharacterized protein. (262 aa)
	A0A0R0EHV9	Uncharacterized protein. (1492 aa)
	I1KG14_SOYBN	Uncharacterized protein. (1728 aa)
	A0A0R0EU10	Uncharacterized protein. (339 aa)
	A0A0R0GH09	Transcriptional adapter. (572 aa)
	A0A368UHY2	Uncharacterized protein. (5031 aa)
	I1KVW9_SOYBN	Uncharacterized protein. (1726 aa)
	I1KZ98_SOYBN	Uncharacterized protein. (421 aa)
	I1LJE7_SOYBN	Uncharacterized protein. (1047 aa)
	I1LXG5_SOYBN	Uncharacterized protein. (765 aa)
	I1N2A0_SOYBN	Uncharacterized protein. (421 aa)

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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Export your current network:

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file format is 'PNG': portable network graphic

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1KZ98_SOYBN	K7KMT5_SOYBN	I1KZ98	K7KMT5	Uncharacterized protein.	Uncharacterized protein.	0.942
I1KZ98_SOYBN	K7MKM1_SOYBN	I1KZ98	K7MKM1	Uncharacterized protein.	Uncharacterized protein.	0.942
I1N2A0_SOYBN	K7KMT5_SOYBN	I1N2A0	K7KMT5	Uncharacterized protein.	Uncharacterized protein.	0.942
I1N2A0_SOYBN	K7MKM1_SOYBN	I1N2A0	K7MKM1	Uncharacterized protein.	Uncharacterized protein.	0.942
K7KMT5_SOYBN	I1KZ98_SOYBN	K7KMT5	I1KZ98	Uncharacterized protein.	Uncharacterized protein.	0.942
K7KMT5_SOYBN	I1N2A0_SOYBN	K7KMT5	I1N2A0	Uncharacterized protein.	Uncharacterized protein.	0.942
K7KMT5_SOYBN	K7MKM1_SOYBN	K7KMT5	K7MKM1	Uncharacterized protein.	Uncharacterized protein.	0.990
K7MKM1_SOYBN	I1KZ98_SOYBN	K7MKM1	I1KZ98	Uncharacterized protein.	Uncharacterized protein.	0.942
K7MKM1_SOYBN	I1N2A0_SOYBN	K7MKM1	I1N2A0	Uncharacterized protein.	Uncharacterized protein.	0.942
K7MKM1_SOYBN	K7KMT5_SOYBN	K7MKM1	K7KMT5	Uncharacterized protein.	Uncharacterized protein.	0.990